Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0236 ATGAGGGGTTTCTTCCCTGCTGAATCCTGTAAAGAGGCTCACCCAAATGCTTTGAATCCTCAGTCTTGGCTTCAAATTGAAAGAGGGAAACTTCCCAAGTTGTCATCACACCCCTCATCTGCCTCAATAGAATCTCTGATCAAGGTCCCACAGCCAGCTATACTGCCATTCTTTAAGCTTGTTGATTATGTTGAAGTTTTAGCTCAAATCCATGAAGAACTTGAGTCTTGTCCTCCACAGGAGAGGTCGAACTTGTTTTTGTTACAATACCAGGTCTTCAGGGGCCTTGGGGAAGTTAAACTGATGCGTAGAAGCCTCCAGGGAGCTTGGCAGAGAGCCCACACTGTTCATGAGAAGATTGTATTTGGGGCATGGTTGAAATATGAGAAGCAAGAGGAAGAGCTAATAGCTGACTTGCTTGGAAATTGTGGTAAATGTGCGAAGGAGTTTGCACCTGTAGATATATCGGCTCATCTTCGATTTGATGTGAATGCAGGTTCTGAGGGGAGAATGACCAATGAGAACCACATTTCTCAAAATGTTACTTTTATGATTGGAAATGAAAAGATAGTTTGTGATAGACAAAAAATTTCAGAACTTTCAGCACCCTTTCATGCAATGCTAAAGGGGCATTTCAGCGAATCGCTCTTTGAGACTATAGATTTGTCAGAAAACAATATCTCTCCTTCAGGTATGAAGGCAATAAGTGATTTCAGTTCAAATGGCAGTTTGATCGAGGTCCCTCCAAATCTTTTGTTGGAGATATTAGTTTTTGCAAACAAGTATTGTTGTGAAAGACTTAAAGATGCTTGCGATAGAAGACTTGCATCCTTAGTTTCCTCCAAAGAAGATGCCGTGGAGCTCATGGAATATGCTCTTGATGAACATTCAAGTGTCCTTGCTGCATCATGTTTACAAGTCCTTTTGCGTGACCTTCCAAACTGTTTGAATGACAATCGGGTGGTGGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGCAGTCATGGTTGGGCCAGGTATATTTTCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATATCCTGGAACGGTTAGTTGAGTTTGCTGAGAATGACAAGCAGAGACTGCTAGCTTTACATCAATTGGGATGTGTACGACTCTTAAGGAAAGAATATGATGATGCACGTTGTCTTTTTGAAGGGGCTGTAAATGCAGGCCATATATATTCTGTGGCAGGTTTAGCTAGACTGGACAATATAAAGGGAGACAAACTTTTGTCTTATGGGCAGCTCAGCTCAGTCATTTCATCTGTTACTCCACTTGGATGGATGTATCAGGAAAGATCACTATACTGTGATGGTGACAAAAGGTGGGAGGACCTTGAGAAAGCAAGTAATCTGGATCCTACTCTTATATATCCTTACATGCACCGGGCTGCCTCTTTAATGAAGACGCAGAATGCTCAAGCTGCACTAGGAGAAATCAATCGGATTCTTGGGTTCAAACTTTCTCTAGAATGCTTGGAAATTCGATTTTTTATCCACCTTTCTCTTGAGGACTACAAAGCAGCTCTATGTGATGTTCAAACAATTCTTACTTTGCGTTCAGATTATAGAATGTTTGAGGGGCGTGTTGCTGCATCCCAACTCTGTACACTTGTGCGTGAGCATGTTGAACGTTGGACAACTGCAGATTGTTGGGCACGGTTATATGATTGTTGGTCTGCAGTTGATGATATTGGGTCTCTGTCTGTTATCTACCAGATGCTTGAATCTGATGCAGCAAAAGGTATTCTATACTTCAGACAGTCATTGCTTCTCCTAAGGTTGAACTGTCCTGAGGCTGCTATGCAGAGTTTACAGTTAGCTCGGCAACATGCATCAAGTGAGCATGAACGACTTGTATATGAGGGGTGGATCTTATATGATACAGGTCATTATGAGGAAGGGCTCCGGAAAGCTGAAGAGTCTATCAATATAAAAAGATCTTTTGAGGCCTTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTATAGATCCATCATGTCCACCAATTGTTATTTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCAGATAATCTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTTATGTTGACTGTGGTAAATTGGACTTGGCTGCTGATTGTTATATCAATGCCCTTAAAATCCGACACACCCGAGCTCATCATGGTCTTGCTCGTGTTCATTGTCTAAAAAATGATAAGGCTGCTTCTTATATGGAAATGACCGAACTTATTAAGAAGGCAAAAAACAATGCATCTGCTTATGAGAAGAGGTCTGAGTACTGTGATCGTGAGCAAGCAAAAGCAGATCTGGAGATGGTCACTAGATTAGATCCCCTTCGGGTGTATCCTTATAGATATCGCGCTGCAGTATTGATGGACAACCACAAGGAAGAGGAAGCCATTGCAGAACTCTCTAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTCCATGAACATAAAGAGGATGTCTTAGGTGCTCAAAGAGACTGTCGTGCTGCCCTCTCAGTGGACCCAAACCACCAAGAAATGTTGGAACTTCATAGTCGAGTCAATAGACACGAGCCATGA 2661 0.4205 MRGFFPAESCKEAHPNALNPQSWLQIERGKLPKLSSHPSSASIESLIKVPQPAILPFFKLVDYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQRAHTVHEKIVFGAWLKYEKQEEELIADLLGNCGKCAKEFAPVDISAHLRFDVNAGSEGRMTNENHISQNVTFMIGNEKIVCDRQKISELSAPFHAMLKGHFSESLFETIDLSENNISPSGMKAISDFSSNGSLIEVPPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDAVELMEYALDEHSSVLAASCLQVLLRDLPNCLNDNRVVEIFVHANKQQLAVMVGPGIFSLFCFLSEVSMNLNSSSDTTAHILERLVEFAENDKQRLLALHQLGCVRLLRKEYDDARCLFEGAVNAGHIYSVAGLARLDNIKGDKLLSYGQLSSVISSVTPLGWMYQERSLYCDGDKRWEDLEKASNLDPTLIYPYMHRAASLMKTQNAQAALGEINRILGFKLSLECLEIRFFIHLSLEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRLNCPEAAMQSLQLARQHASSEHERLVYEGWILYDTGHYEEGLRKAEESINIKRSFEAFFLKAYALADSSIDPSCPPIVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAASYMEMTELIKKAKNNASAYEKRSEYCDREQAKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGAQRDCRAALSVDPNHQEMLELHSRVNRHEP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0236 886 ProSiteProfiles TPR repeat profile. 709 742 IPR019734 GO:0005515
Aed4g0236 886 Coils Coil 761 781 - -
Aed4g0236 886 PANTHER ETO1-LIKE PROTEIN 1 1 886 - -
Aed4g0236 886 Coils Coil 363 383 - -
Aed4g0236 886 SUPERFAMILY POZ domain 175 275 IPR011333 -
Aed4g0236 886 Gene3D Tetratricopeptide repeat domain 597 781 IPR011990 GO:0005515
Aed4g0236 886 PANTHER ETO1-RELATED 1 886 IPR044631 GO:0010105
Aed4g0236 886 SUPERFAMILY TPR-like 692 877 IPR011990 GO:0005515
Aed4g0236 886 SMART tpr_5 838 871 IPR019734 GO:0005515
Aed4g0236 886 SMART tpr_5 601 634 IPR019734 GO:0005515
Aed4g0236 886 SMART tpr_5 709 742 IPR019734 GO:0005515
Aed4g0236 886 SMART tpr_5 635 668 IPR019734 GO:0005515
Aed4g0236 886 Pfam BTB/POZ domain 179 275 IPR000210 GO:0005515
Aed4g0236 886 Gene3D Potassium Channel Kv1.1; Chain A 170 319 IPR011333 -
Aed4g0236 886 Gene3D Tetratricopeptide repeat domain 359 546 IPR011990 GO:0005515
Aed4g0236 886 SUPERFAMILY TPR-like 382 738 IPR011990 GO:0005515
Aed4g0236 886 Gene3D Tetratricopeptide repeat domain 784 885 IPR011990 GO:0005515
Aed4g0236 886 SMART BTB_4 179 279 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0236 Aed-Chr4 1698008 1703129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0236 - - gmx:100793740 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0236 4 1698008 1703129 Aed8g0850 8 7198209 7204056 PCT