Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0227 ATGGATGCAAATTGTTTTAGGCTGAACAAGAGTTCAGCACTGTTATGTTCAACTCACTGGAACCCCATCAAACGTAAACCAGAACATCCTTATGTGGTTGCAATGCTCAGAACTCCCTCAGACAACAACATTACAGGAGAAACAAGAAAGACTAATGTCTACAAAGACAACTTCTTTGATCGTTTAGCAATACACCATCTATCAAAAAACGTTCAAGAAGCCACCGGACTCAGTAACAACAAGAGTGGGTATGAGAGCTTGGTTGAGGCTGCTACTGTGGCCAAAGAGAAATTTGACCCTATTCAGCAGCAAGAGGTTGTCATTCTAGCTCTTCAAAGAGCCTTCCCAAAGCCAATACTTTCATTGATAAAGACAGTGCTACCACCATCAAAACTCGCGAGGGAATATTTTGCCGTTTTCACCACTTTGTTCTTTGCTTGGTTAGTCGGGCCTTCCGAGGTGAGAGAATCAGAGGTCAACGGGAGAAGGGAAAAAAATGTAGTCTACGTCACAAAATGCAGGTTTTTAGAGGAGACAAACTGTGTAGGGATGTGTATTAATCTCTGCAAAATGCCATCTCAAGCGTTTATAAAGGACACTCTGGGGATGCCACTCAACATGGTCCCCAATTTTGATGACATGAGTTGTGAGATGGTATTTGGACAGGATCCACCAGCATCAACTGATGATCCAGCACTCAAGCAACCATGCTATAAACTATGTAAGGCATATAAAAACCATGGGACGGACTGCTTCAGTAGTTAA 765 0.4261 MDANCFRLNKSSALLCSTHWNPIKRKPEHPYVVAMLRTPSDNNITGETRKTNVYKDNFFDRLAIHHLSKNVQEATGLSNNKSGYESLVEAATVAKEKFDPIQQQEVVILALQRAFPKPILSLIKTVLPPSKLAREYFAVFTTLFFAWLVGPSEVRESEVNGRREKNVVYVTKCRFLEETNCVGMCINLCKMPSQAFIKDTLGMPLNMVPNFDDMSCEMVFGQDPPASTDDPALKQPCYKLCKAYKNHGTDCFSS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0227 254 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 14 250 - -
Aed4g0227 254 Pfam Beta-carotene isomerase D27-like, C-terminal 147 227 IPR025114 GO:0005506
Aed4g0227 254 PANTHER BETA-CAROTENE ISOMERASE D27 14 250 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0227 Aed-Chr4 1633074 1637785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0227 K17911 - gmx:100813404 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0227 4 1633074 1637785 Aed8g0864 8 7347760 7353141 PCT