Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0224 ATGCCTTTCGCGATGAAGATTCAGCCGATTGACTCGAGCGTGCCTGAGGAGGCGACTCGGCTTGAGCCGATGAAGCCGGTGGTGAAGTCGCGGCTGAAGCGGCTCTTCGAGCGCCAGTTCTCCGGCGTCCTCAGGAATTCGTCGGCGGTGGAGAAGATCGCCGCCGAGGAGCCGCCGCATTCCGGCAAAGACGGCTCCGCTGATTTTGAACCAAGCTCGGTGTGTCTGGCGAAAATGGTGCAGAATTTCATGGAAGAGAATCACGAGAAGAACTCCGTTTCCGTGAAGTGTGCACGCAACCGCTACAACAGCTTCGACGACATCTCAGACGCCGAAACGCTTGCGTTTTGTGGTTTCGGCGAGTCCAATTATTCTTCCTCTGGTGAAGCACACGAAATCCTCAAGGGTTTGGTGGCATGTGCGAGCGTCAGTGAAAGGAATTTGTTAGCGGACACTACAAGGATAATTGAGAAGAACAAGGCAACGTGCAAACGCAAAGACGATTGTTGTAGAAAGATCGTTTCTGAAGCTTTGTTAGCTCTCGGATACGACGCTTCCGTCTGCAAATCTCGCTGGGAAAAATCAACTTTCTGTCCAGCCGGGGAATATGAATACATTGATGTGATAATGGGAAAGGAGCGGGTGGTGGTTGACGTTGACTTCAGATCAGAATTCGAGATTGCTCGACCCACCAAGACATACAAAGCGATCATCCAAACGCTGCCTTATGTATTCGTGGGCACGTGCGAACGGTTGCAGAGTATCGTGGCCATCGCTTCGGAGGCGGCGAAACAGAGTCTGAAGAAAAGGGGCATGCACGTTCCGCCGTGGAGAAAAGTCGAGTACGTGAGAGCGAAGTGGCTTTCCGCTTACACGTGCTCGCGCGGGGTCAAAGAGGAAACCCAAGAGAAAGAGCACCCTGTGAAAGAGTTGGTGTTAACTGGTTCGTGCGAAAGTTCCCGTGAAGATGATAAGGAAAGGTCAAAGTCAAATCTGGTGGTTCAGAAGCCATTGGAGATGAAACCCAAGAGTTCACAGTCCGGTTTGGCAGCTGTGTTCCTTGAAAACCCGTGA 1074 0.5196 MPFAMKIQPIDSSVPEEATRLEPMKPVVKSRLKRLFERQFSGVLRNSSAVEKIAAEEPPHSGKDGSADFEPSSVCLAKMVQNFMEENHEKNSVSVKCARNRYNSFDDISDAETLAFCGFGESNYSSSGEAHEILKGLVACASVSERNLLADTTRIIEKNKATCKRKDDCCRKIVSEALLALGYDASVCKSRWEKSTFCPAGEYEYIDVIMGKERVVVDVDFRSEFEIARPTKTYKAIIQTLPYVFVGTCERLQSIVAIASEAAKQSLKKRGMHVPPWRKVEYVRAKWLSAYTCSRGVKEETQEKEHPVKELVLTGSCESSREDDKERSKSNLVVQKPLEMKPKSSQSGLAAVFLENP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0224 357 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 352 - -
Aed4g0224 357 MobiDBLite consensus disorder prediction 312 332 - -
Aed4g0224 357 Pfam PDDEXK-like family of unknown function 78 292 IPR006502 -
Aed4g0224 357 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 171 292 IPR006502 -
Aed4g0224 357 PANTHER OS03G0796600 PROTEIN 25 352 IPR006502 -
Aed4g0224 357 MobiDBLite consensus disorder prediction 312 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0224 Aed-Chr4 1622613 1624618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0224 - - gmx:100796711 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0224 4 1622613 1624618 Aed8g0866 8 7361319 7363624 PCT