Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0222 ATGCTTTTGGTGAAAAGCTTTGTTATTGTTCTATGGGTTTCTAGAATGTGCAATGAATTGGTTGTCATGGGTTTGTTTTCCGTGAAGATTCGTTTTTTCGTTCTCGTAATTCTCAATTTTATGGCTCTTGCTCTGAAGTCAAGTTGCTTTTTGCAATTGAAGAAACCTGAGGCTGGTTTCAATGTTTGTTTTTCTTCTAAGAAAGCTACAATCTCCGTGAAACGACACACTCCAGTGGCTGCTATCAGGAGCATGGAATCAGTGGGACTTTCTGCAACATTCTCTAGACTGAAAAAACAAGGAAAAGTGGCTTTAATCCCATATATCACTGCTGGTGATCCTGACCTTTCAACCACAGCAGAAGCACTGAAAGTGCTTGATTCATGCGGATCTGACATAATTGAGCTAGGCGTTCCTTACTCTGATCCTTTGGCAGATGGTCCTGTTATCCAGGCTGCTGCTACAAGATCTTTAGCAAAGGGGACCAATCTTGATGCGATTATTTCTATGTTAAAGGAGGTTGTTCCACAATTGTCATGTCCAATTGCACTGTTTACATATTACAATCCAATACTGAAGCGTGGTACTGCAAAATTTATGTCCACCATTAGAGACACTGGCATACATGGGCTTGTAGTCCCAGATGTCCCTCTGGAGGAGACAGAAACTTTAAGGATAGAAGCTAAGAAAAATGGAATTGAACTGGTACTCCTCACAACACCCACCACTCCAACAAACCGAATGAAAGCCATTGTTGATGCAGCAGAAGGATTTGTGTATCTGGTGAGCTCAATTGGGGTGACTGGAGCCCGAGCATCAGTTAGTGGTTCTGTTCAGTCTCTTCTGCAGGAAATTAAAGAGGCAACAGATAAACCTGTGGCAGTTGGTTTTGGAATATCAAAACCTGAGCATGTGAAACAGGTAGCAGGATGGGGAGCTGATGGTGTGATTGTTGGCAGTGCTATGGTGAAGGTGCTTGGTGAGGCCAATTCTCCTCAAGAGGGATTGAAAGAACTGGAAGTTTTCACCCGCTCTTTGAAGGCTGCCCTTCCTTGA 1056 0.4318 MLLVKSFVIVLWVSRMCNELVVMGLFSVKIRFFVLVILNFMALALKSSCFLQLKKPEAGFNVCFSSKKATISVKRHTPVAAIRSMESVGLSATFSRLKKQGKVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLAKGTNLDAIISMLKEVVPQLSCPIALFTYYNPILKRGTAKFMSTIRDTGIHGLVVPDVPLEETETLRIEAKKNGIELVLLTTPTTPTNRMKAIVDAAEGFVYLVSSIGVTGARASVSGSVQSLLQEIKEATDKPVAVGFGISKPEHVKQVAGWGADGVIVGSAMVKVLGEANSPQEGLKELEVFTRSLKAALP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0222 351 Hamap Tryptophan synthase alpha chain [trpA]. 100 349 IPR002028 GO:0004834|GO:0006568
Aed4g0222 351 Pfam Tryptophan synthase alpha chain 94 349 IPR002028 GO:0004834|GO:0006568
Aed4g0222 351 CDD Tryptophan_synthase_alpha 104 347 IPR002028 GO:0004834|GO:0006568
Aed4g0222 351 ProSitePatterns Tryptophan synthase alpha chain signature. 134 147 IPR018204 GO:0004834
Aed4g0222 351 Gene3D Aldolase class I 89 351 IPR013785 -
Aed4g0222 351 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 86 350 - -
Aed4g0222 351 TIGRFAM trpA: tryptophan synthase, alpha subunit 94 347 IPR002028 GO:0004834|GO:0006568
Aed4g0222 351 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 86 350 IPR002028 GO:0004834|GO:0006568
Aed4g0222 351 SUPERFAMILY Ribulose-phoshate binding barrel 91 330 IPR011060 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0222 K01695 - gmx:100808400 554.288