Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0217 ATGCAACATTTTCAGCCGGAGCCCCACATCGCCTCCGACGCTAAGCCCGGCGGCAAAAAACGCGGCAGCTACATCTGCGGTCGCTGCGGCCTCCCTAAGAAGGGTCATGACTGCTCCGTCAAGGCCACCGCCACCCCCAACTCCGCTTCTTCCGCCTCCCCTTCCCATTCCTCTTTCTCCGCCGTCTCCGCCTCCCGACGCGCCCTCTCCTTCGACGACGGCGACGACAACGAAGCCGGCAGACTCGATCCCTTGGAGCCCGCTGATGTGTGGTCCGAAGGAGATGATCTGGATTCGTCCGGGTTGCCGAGTAATCTTCTATGGGAAGTGCTGAGAAGGCTGCCGCCGCCGGAGCTATTAACGGCGGCGAAGGTGAGCAGAGGTTGGAGAGAGATCACAAGGGGTTTGTGGAGTGCCGCGGAGGAGTTAAGACTTAGGGTTCCGGCGAGGGCTCAGTTGGGTTTTGTGGCTTCGATGTTGCAGAAGTGTCCCGGGATTGTGAAACTCACTCTTAGACTGGAAAGTGATGTGGATTCCACGATGCTGGCTTGTATTGCATTCTCATGCCCTAACTTGGGATTCTTCGAGATCTCGGTCTCTGATACTGCAGTTAACCGGATCAGCGGGGGTGAGTTAGGTCGGTTTGTTGCTGATAAAAAGAGCCTGAAAAGCCTCAAGATGGAAAGTTGTTCTAACCTTGGAGGTTTTGTACTTTGTTCTTCTAGTCTTTCTACCCTTTGGTTGTCTGATCTGTACTCTCTTTCTAAAATGGTCTTTAATTGTCCACAGTTGAGAGAGATTTCATTGGAGTTTGCTCCCCGAGAAAGTGACAGTACTGATCTTACAAACATGGTTGAAGGTTTGGGAAGAAGTTGCCCGAGGTTGCAAAATATACATATATCTTCAATGCGGCTTTCTCATGCTGCTGTTCTTGCTCTTGCTGCTGCTCAATTAAGGGGGTTGCGAATGCTTTCACTTGTTCTTGGATCCGAAGTTACTGATGCATCTGTTGCTGCAATTGCCTCAAGCTATCTACATCTTGAATTGCTCGATCTCAGTGGATCCAGCATTAGTGACAGTGGCGTTAGCATGATTTGCAATGTGTTCTCTGAAACATTGACAAGACTCCTTCTCGCCCTTTGCCCTTATGTGACCTCAAGTGGCATTCAATTTGCTACGGCTCAATTGCCACATCTTGAACTTATGGACTGTGGCATGACCATATGTGAACCTAATTCCCACCATCCAACTGCTGATGAAAATAACAGCAAATTACAGAAAACATCTAGTACTAATCTACACCTTACAACCCAAAAGTTAATCATCAAACATGGCTGTTTAAAGAAACTTAGTTTATGGGGATGCTCAGGCTTGGATGCCTTATATTTAAACTGTCCACAACTCAATGATCTGAATCTAAATGCTTGTAGAAATCTGCATCCAGAGAGACTGCTGCTTCAGTGTCCCAGTTTAGAGAATGTGCATGCATCTGGTTGTCAGGACCTGCTAATTTGGGCAATCCAAAGTCAGGTTTGCAATGCTTTTACTGATATGGAAAATCCTTCACCTTGTAAACGTTTACCTGATGGCTCCAAAAGGATTCGGGTTCCTCATTTAGTTAATACTGAGTCCCCAGAGGATGAAAAGAAGCGAAGGAGAAAGAAGAGACGGCTTTGTAACGTACTTGTGGATTGA 1695 0.4779 MQHFQPEPHIASDAKPGGKKRGSYICGRCGLPKKGHDCSVKATATPNSASSASPSHSSFSAVSASRRALSFDDGDDNEAGRLDPLEPADVWSEGDDLDSSGLPSNLLWEVLRRLPPPELLTAAKVSRGWREITRGLWSAAEELRLRVPARAQLGFVASMLQKCPGIVKLTLRLESDVDSTMLACIAFSCPNLGFFEISVSDTAVNRISGGELGRFVADKKSLKSLKMESCSNLGGFVLCSSSLSTLWLSDLYSLSKMVFNCPQLREISLEFAPRESDSTDLTNMVEGLGRSCPRLQNIHISSMRLSHAAVLALAAAQLRGLRMLSLVLGSEVTDASVAAIASSYLHLELLDLSGSSISDSGVSMICNVFSETLTRLLLALCPYVTSSGIQFATAQLPHLELMDCGMTICEPNSHHPTADENNSKLQKTSSTNLHLTTQKLIIKHGCLKKLSLWGCSGLDALYLNCPQLNDLNLNACRNLHPERLLLQCPSLENVHASGCQDLLIWAIQSQVCNAFTDMENPSPCKRLPDGSKRIRVPHLVNTESPEDEKKRRRKKRRLCNVLVD 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0217 564 MobiDBLite consensus disorder prediction 41 65 - -
Aed4g0217 564 SUPERFAMILY RNI-like 210 500 - -
Aed4g0217 564 Gene3D Ribonuclease Inhibitor 141 441 IPR032675 -
Aed4g0217 564 MobiDBLite consensus disorder prediction 69 83 - -
Aed4g0217 564 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 16 563 - -
Aed4g0217 564 SUPERFAMILY F-box domain 100 138 IPR036047 GO:0005515
Aed4g0217 564 MobiDBLite consensus disorder prediction 523 553 - -
Aed4g0217 564 Pfam F-box domain 100 135 IPR001810 GO:0005515
Aed4g0217 564 ProSiteProfiles F-box domain profile. 96 140 IPR001810 GO:0005515
Aed4g0217 564 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 16 563 - -
Aed4g0217 564 MobiDBLite consensus disorder prediction 1 21 - -
Aed4g0217 564 MobiDBLite consensus disorder prediction 37 95 - -
Aed4g0217 564 Gene3D - 95 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0217 Aed-Chr4 1560687 1566060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0217 - - gmx:100792669 880.167