Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0214 ATGAATCAATCGCATCGGTGGCAGAGGACTCTGATCCTCTCTCTGCTCTCCCTCTCCGTCGTTGCTCCGCTCTTTCTCGTCTCCCACCGGCTCAACAATCTCACTCCCGACGGACGACGAGACTTTCTTGATGATATATCGAGTTTTACATATAGGTCAGATCCTTTAAATGCAATTGAACAGGAAGATGCTGAAGAATTAGAAGAGCCAACGGAAGTTGTTTATAAAGAAAAAGATTTTGATTCAAAAAATAGTTACATTTTGCAAAAGACTAATGATTCTAAGGAATCTAAAAGTCAGGGGTATAGCAATAACAATTTGGAAAGAAATGAATTTGACCAGGACAAAATACAAGACCAGGAGGCTCAGCAAAAAGAAGTATTCTCCACGAATGGGGATGTGAATATATTTAATACAACAGTCACACATAATCAGAATATACACACTCAGTCTCAAAGGTTGAAAGATGAGAATGTTGAAGTGACAGATAAGCAATCTAGTCCAAAAGCAATCCAACATCGTCAAAGTTCATGCCCTCCGTCTCTGAGAGAGACAAACCAGAAGGTTTTGGAGATTAAGGATCAAATTATTAGAGCCAGAGCATACTTGGGGTTTGCTCCACCAAACAGCAACTCACACTTGGTGAAGGAGTTAAAGCTGAGGATTAAAGAGATGGAACGTACTGTTGGAGAAGCTACTAAGGATTCAGATCTATCAAGGAGTGCTTTGCAGAAAATGAGACACATGGATGCTTCACTGTCTAAAGCCAACCGTGCTTTCCCAGACTGCACATCTATGGCAGCTAAGCTCCGTGCAATGAATCATAATGCTGAAGAACAAGTTCGTTCTCATCAACACGAAGCAACATATCTTGTTCATCTTGCTGCAAGGACCACTCCAAAAGGTCTTCACTGTCTTTCTATGCAGCTAACTGCTGATTACTTCGCCCTGAGACCCGAGGACCGGAAGCTTCCAAATGAAAATAAGATTCATGATCCAAAACTTCATCATTATGCTGTCTTCTCTGACAATGTTCTGGCATGTGCAGTGGTTGTTAACTCCACTGTCTCTAATGTGAAGAAACCTGGGAAACTTGTTTTCCATGTAGTGACTAATTCACTCAACTTTCCTGCAATCTGGATGTGGTTCTTATCAAACCCTCCTGGTGAAGCCACAGTCGACATACAAAGCATAGAGAACTTTGCATGGTTGCCCAAGTACAATACATTCAACAAATATAATTTCAGTGATCCAAGATATACTTCTGAGTTGAACTACCTGCGTTTCTACCTGCCAGATATCTTCCCTACTTTAAATAAGATTCTGCTCTTTGATCACGATGTGGTGGTGCAACAAGGTCTCAGTGGACTATGGAATGCCGATATGCAAGGAAAAGTAGTTGCAGCAGTGGGCACTTGTCAGGAAGGTGAAACCTCATTTCATAGGATGGATATGTTCATAAACTTCTCAGATCCTTTCATTGCAAAGAGGTTTGATGTCAATGCTTGCACATGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGGAGACATAATTTAACTGCTCTCTATCACAGATATTTGCAAATGGGTTCCAAGAGGCCAATGTTTAACATTGGAAGTCTGCCGTTAGGCTGGCTGACTTTCTATAACAAGACTAAGGTTTTGGACAGACGGTGGCACATGCTTGGCCTTGGTTACGACGCAGCTGTCGATAAAAATGAGATTGAACGGGCTGCCGTTATACACTTCGATGGAATTAGGAAACCTTGGTTGGACATTGCAATGGGAAGATATAGAAGTTATTGGACCAAATACATGAACTTCGACCTCCCTATTTTGCGACGTTGCAATCTCCAGGCGTAG 1872 0.4177 MNQSHRWQRTLILSLLSLSVVAPLFLVSHRLNNLTPDGRRDFLDDISSFTYRSDPLNAIEQEDAEELEEPTEVVYKEKDFDSKNSYILQKTNDSKESKSQGYSNNNLERNEFDQDKIQDQEAQQKEVFSTNGDVNIFNTTVTHNQNIHTQSQRLKDENVEVTDKQSSPKAIQHRQSSCPPSLRETNQKVLEIKDQIIRARAYLGFAPPNSNSHLVKELKLRIKEMERTVGEATKDSDLSRSALQKMRHMDASLSKANRAFPDCTSMAAKLRAMNHNAEEQVRSHQHEATYLVHLAARTTPKGLHCLSMQLTADYFALRPEDRKLPNENKIHDPKLHHYAVFSDNVLACAVVVNSTVSNVKKPGKLVFHVVTNSLNFPAIWMWFLSNPPGEATVDIQSIENFAWLPKYNTFNKYNFSDPRYTSELNYLRFYLPDIFPTLNKILLFDHDVVVQQGLSGLWNADMQGKVVAAVGTCQEGETSFHRMDMFINFSDPFIAKRFDVNACTWAFGMNLFDLQQWRRHNLTALYHRYLQMGSKRPMFNIGSLPLGWLTFYNKTKVLDRRWHMLGLGYDAAVDKNEIERAAVIHFDGIRKPWLDIAMGRYRSYWTKYMNFDLPILRRCNLQA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0214 623 MobiDBLite consensus disorder prediction 85 109 - -
Aed4g0214 623 MobiDBLite consensus disorder prediction 147 182 - -
Aed4g0214 623 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 336 612 IPR029044 -
Aed4g0214 623 MobiDBLite consensus disorder prediction 85 108 - -
Aed4g0214 623 Pfam Glycosyl transferase family 8 305 597 IPR002495 GO:0016757
Aed4g0214 623 PANTHER HEXOSYLTRANSFERASE 1 622 - -
Aed4g0214 623 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 622 IPR029993 GO:0047262
Aed4g0214 623 SUPERFAMILY Nucleotide-diphospho-sugar transferases 337 620 IPR029044 -
Aed4g0214 623 Coils Coil 267 287 - -
Aed4g0214 623 Coils Coil 215 235 - -
Aed4g0214 623 MobiDBLite consensus disorder prediction 164 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0214 Aed-Chr4 1548109 1555232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0214 1 623 Glycosyltransferase AT1G06780 48.281 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0214 K13648 - gmx:100793193 1074.31