Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0197 ATGAATCCCGATTGGGATAGCGGCGGCAGCGATGGTGGTGGCGCAACGCTAATCCCGGGTCTCCCAAACGACGTGGCGGCGTGGATACTTTCGAAGGTGCCGTACTGCCACCACGGGAGGCTGAAAACGACATGCAAATCATGGAGAGTGGTTCTGTCCTCGAAATCGTTCTTGTCCTCGCTGAACAGCCGCAACCATCTTCTGTGTATTTTCCCGCAGGACCCTTCGATCCCTCCTTCGCCGTTCCTCTTCGATCCGAACGCGCTTGCGTGGTGCCCGCTCCCTCCCATGCCTTGCAACCCCCACGTCTACGGCCTCTGCAACTTCTCCGCAGTCTCCCTCGGGTCCCACCTCTACGTCCTCGGCGGGTCCCTCTTCGACACGCGCTCCTTCCCCATCAATCGCCCCTCTTCCTCCTCTTCTACGTTCCGCTTCAGCTTCCACGACTTCTCGTGGGAGCCACGCGCTCCGATGCTCTCGCCCAGGGGCAGCTTCGCCTGCGCTGTGGTGCCGTCCCAGGGGACCATTCTTGTTGCCGGCGGGGGTTCGAGGCATACGGTGTTCGGAGCGGCCGGGTCGAGGATTCGGTCGGCGGAGCGGTACGAGGTTGGGAGGGACCGATGGGTGCCGATGGAGCCGCTCCCCGGGTTTCGAGCGGGGTGTGTGGGGTTTGTCGGAGGGGAGGGAAGGGAGTTCTGGGTGATTGGAGGGTACGGCGCGTCGAGAACCATTTCGGGGGTTTTTCCGGTCGATGAGTATCATAGGGATGCGGTGGTCATGGGACTCGAGAGTGGCGCGTGGAGAGAGGTTGGGAATATGTGGGGTCATGGGGAGAGGGTCAGGGTTGGGAAGATTGTTGTGGTTGATGATATTGGATGCCCCATGCTTTTCATGCTTGATGGGAATGAGATTTTGAGATATGACATGTCTTCAAATCGTTGGCAATACGAGTCTCGTGTGCCAAGAAAAGCTCCTTACAATTCGTCATTTGGTTTTGTGGTAGTAGACGGGGAGCTGTATGTAGTGACACATTTATGTGTTGTTGATTTTACAGAAACACGAAGGTCCAGACAACATAAGAGGGCAGGAACTCTGTTCATTCAAATCTATGACCCAAAAAAGAAGACATGGAGATCGCTTGTTGCCAAATCACCTTTCAATTGCCCTATAGATATTAATAGTGCTGTATTGAGCTCAATTTGTCTATGA 1209 0.555 MNPDWDSGGSDGGGATLIPGLPNDVAAWILSKVPYCHHGRLKTTCKSWRVVLSSKSFLSSLNSRNHLLCIFPQDPSIPPSPFLFDPNALAWCPLPPMPCNPHVYGLCNFSAVSLGSHLYVLGGSLFDTRSFPINRPSSSSSTFRFSFHDFSWEPRAPMLSPRGSFACAVVPSQGTILVAGGGSRHTVFGAAGSRIRSAERYEVGRDRWVPMEPLPGFRAGCVGFVGGEGREFWVIGGYGASRTISGVFPVDEYHRDAVVMGLESGAWREVGNMWGHGERVRVGKIVVVDDIGCPMLFMLDGNEILRYDMSSNRWQYESRVPRKAPYNSSFGFVVVDGELYVVTHLCVVDFTETRRSRQHKRAGTLFIQIYDPKKKTWRSLVAKSPFNCPIDINSAVLSSICL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0197 402 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 14 402 - -
Aed4g0197 402 SUPERFAMILY Kelch motif 67 380 IPR015915 GO:0005515
Aed4g0197 402 SMART kelc_smart 175 227 IPR006652 GO:0005515
Aed4g0197 402 SMART kelc_smart 117 172 IPR006652 GO:0005515
Aed4g0197 402 Pfam Kelch motif 106 158 IPR006652 GO:0005515
Aed4g0197 402 Gene3D - 68 390 IPR015915 GO:0005515
Aed4g0197 402 SUPERFAMILY F-box domain 12 101 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0197 - - gmx:100820159 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0197 4 1447788 1453124 Aed4g0197 4 1447788 1453124 ECH