Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0194 TTCGCTTCTGTAGTTTCCGTGTTAATCAGTGAGAATTATCGGTTAATTAATTACGATAATTTTGTTACTGGAAACAGAGATTGGACGATCTCGCGAGCCATGAATGCTAGACGAGACAATCGTAACAATAGAGTTTCCCTTTTTGATGGTATCGAGGAGGGTGGCATCAGAGCATCATCTGTTTACTCCTCTTCTCATGAAATTGATGAACACGAAAATGAACAGGCATTGGGTGGATTGCAAGATAGAGTCAATCTGCTGAAAAGATTATCAGGTGATATAAATGAGGAGGTGGATAGCCATAACCACATGCTGGATCGAATGGGCAATGATATGGATTCATCAAGAGGAGTCCTTTCGGGCACTATGGACAAATTTAAAATGGTGTTCGAGACCAAATCCAACCAGAGAATGTTTACGTTTGTAGCATCCTTTGTTGTGCTTTTTCTTATAATATACTACCTCACTAGGTAA 474 0.3966 FASVVSVLISENYRLINYDNFVTGNRDWTISRAMNARRDNRNNRVSLFDGIEEGGIRASSVYSSSHEIDEHENEQALGGLQDRVNLLKRLSGDINEEVDSHNHMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSNQRMFTFVASFVVLFLIIYYLTR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0194 157 SMART tSNARE_6 62 129 IPR000727 -
Aed4g0194 157 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 67 129 IPR000727 -
Aed4g0194 157 Gene3D - 75 138 - -
Aed4g0194 157 PANTHER BET1-LIKE SNARE 1-1 34 157 - -
Aed4g0194 157 CDD SNARE_Bet1 70 127 IPR039899 -
Aed4g0194 157 SUPERFAMILY SNARE fusion complex 64 129 - -
Aed4g0194 157 PANTHER GOLGI SNARE BET1-RELATED 34 157 IPR039897 GO:0015031|GO:0030173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0194 Aed-Chr4 1423447 1426970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0194 K08504 - gmx:100814836 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0194 4 1423447 1426970 Aed4g0194 4 1423447 1426970 ECH
Aed4g0194 4 1423447 1426970 Aed8g0211 8 1793646 1799109 PCT
Aed8g0898 8 7737731 7740468 Aed4g0194 4 1423447 1426970 PCT