Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0193 ATGGTTATGGATTCGTCGAAGGACGTCGCTTTGGTATCCTCGGATATGGAGAAGTTCCTGTGCGAGTTGTTGCTGGATTCCTCCCAGCCAATTTCTGAGCGCTTCAGAGCACTCTTCTCTCTCCGCAACCTCAAAGGTCCCGCCCCGCGCAACGCCCTTATACTCGCCACAAGGGATTCGTCGAATTTGTTGGCGCACGAAGCTGCATTTGCGTTGGGTCAAATGCAGGAAACGGAAGCCATCCCTGCTTTGACCTCAGCAGCTGAGGCTCTGGGTGCTATTGGTTCAGATGGTAATGTTCCTCTCCTGAAAAATAGTTTGGATTCAGATCCTGCCGAGGAGGTTCGAGAAACATGTGAATTGGCTCTTCAACGAATTCAGCATTTAAAAGATGCTGGTAATACTGATGAATTGTCTGCAACTGATATATCTCCTTTTAAGTCTGTTGATCCAGCTGCCCCAGCGACCTCTGGTTCTTCTGCTGATCAACTAAGGCAAGTACTTCTTGATGAAGAAAAAGGGATGTATGAGCGCTATGCAGCTCTTTTTGCACTTCGAAATGATGGTGGAAATGAAGCTGTTGCTGCTATTATTGATTCCCTGGGCTCAAAAAGTGCTCTACTGCGCCATGAGGTTGCATATGTTTTGGGTCAACTGCAAGACAAAGCTGCTTCAGCTGCCCTATCCAATATACTTAAAGATGTGAATGAACACCCAATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGATGACCAAAGTGTAGCCCTTCTAGAGGAGTTTTCGGCAGATCCAGAGCCTCTTGTCTCACAGAGTTGTCAAGTTGCTCTAAGCATGCTAGAATTTGAACGATCAGGGAAATCATTCGAGTTCCTGTTCATGCGCACTCCAACTGTGCATTAA 912 0.4682 MVMDSSKDVALVSSDMEKFLCELLLDSSQPISERFRALFSLRNLKGPAPRNALILATRDSSNLLAHEAAFALGQMQETEAIPALTSAAEALGAIGSDGNVPLLKNSLDSDPAEEVRETCELALQRIQHLKDAGNTDELSATDISPFKSVDPAAPATSGSSADQLRQVLLDEEKGMYERYAALFALRNDGGNEAVAAIIDSLGSKSALLRHEVAYVLGQLQDKAASAALSNILKDVNEHPMVRHEAAEALGSIADDQSVALLEEFSADPEPLVSQSCQVALSMLEFERSGKSFEFLFMRTPTVH 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0193 303 Pfam PBS lyase HEAT-like repeat 208 234 IPR004155 -
Aed4g0193 303 Pfam PBS lyase HEAT-like repeat 241 267 IPR004155 -
Aed4g0193 303 Pfam PBS lyase HEAT-like repeat 66 88 IPR004155 -
Aed4g0193 303 Gene3D - 10 142 IPR011989 -
Aed4g0193 303 Gene3D - 147 292 IPR011989 -
Aed4g0193 303 MobiDBLite consensus disorder prediction 136 158 - -
Aed4g0193 303 PANTHER PBS LYASE HEAT-LIKE PROTEIN 21 228 - -
Aed4g0193 303 PANTHER PBS LYASE HEAT-LIKE PROTEIN 205 288 - -
Aed4g0193 303 PANTHER DEOXYHYPUSINE HYDROXYLASE 21 228 - -
Aed4g0193 303 Coils Coil 112 132 - -
Aed4g0193 303 PANTHER DEOXYHYPUSINE HYDROXYLASE 205 288 - -
Aed4g0193 303 Hamap Deoxyhypusine hydroxylase [DOHH]. 17 293 IPR027517 GO:0008612|GO:0019135
Aed4g0193 303 SUPERFAMILY ARM repeat 17 86 IPR016024 -
Aed4g0193 303 SMART E-Z type HEAT repeats 206 235 IPR004155 -
Aed4g0193 303 SMART E-Z type HEAT repeats 62 91 IPR004155 -
Aed4g0193 303 SMART E-Z type HEAT repeats 175 204 IPR004155 -
Aed4g0193 303 SMART E-Z type HEAT repeats 31 60 IPR004155 -
Aed4g0193 303 SMART E-Z type HEAT repeats 239 268 IPR004155 -
Aed4g0193 303 SUPERFAMILY ARM repeat 86 282 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0193 K06072 - gmx:100815364 513.072