Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0191 ATGAGAGTAAAAGGAGGGAAGAGCGAGCGTGAGAGTGAGAGTGAGAGTGGAAGTGAGTTTGAGAGAATGTCGAACCCTCAAAATCAGAAACCATGGAAGGCGGAATACGCGAAGTCGGGACGATCGTCATGCAGGACGTGCAAGAGCCCCATTGCCAGCGAAACGCTGCGTCTCGGCAAGATGGTTCAGTCCAGCAAATTCGACGGTCTCATGCCCATGTGGAATCACGCTGCTTGCATACTGAAGAAAGCCAAACAGATAAAATTAGTTGAAGATGTTGAAAACTTAGAGTCGCTTCGATGGGAAGATCAGCAGAATATCAGAAAATACATAGAGAGTGGCGGCGGTAGTGGTGGCGGAAGTAGCAGTGGCAGTGGCAACGTGGAAAAGTCAAACTCCAAAGCTGTCAAAGATATTGAATGTGATATTGAAGTTTCAAAAGCTTCTCGTGCTACTTGCAGGGATTGCGGTCAAAAAATTATCAAAGGAGAGGTTCGTATATCTACTAAGCCTGATGGTCAAGGTGCTAAAAGTTTGGGTTGGCACCATGCCAAGTGTCTCATGGAACTATCCCCATCAATTCAAGTGGATAAGTTAGCTGGATGGAATAGTCTCTCATCTTCTGATCAATCAGCTGTCAATGACTTTGCTAAGAAGGGTCGTCCTATGAATAAAGGGGGTGGTAGTGGTACAAAAATTGAGACCAAGGAAGGTAAAGAATCCACACAACAACAAACTTCCAAAGGTGGCATAAAACGGGGGAAGGATGTTGATAGTGAGCGGAAATCAAAAGTTGCTAAGGCCAAGGGAGATGTGTCTGCAGGCAGCGCAGTGTCAGTAAAGAATTCTAATGAATCAGGGGAAGCATGTGATCTGGAGAAGGAAATGGAGACCCAGAGCAAAGAACTCTGGTCTCTGAAGGACGATCTCAAAAAGAATGTTACAACAACAGAGTTGCGTGTAATGCTGGAAGCCAATGGTCATGATTCAACAGGATCAGAACTTGATTTACGTGACCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGCTCTTTGCCCAATATGTTCTGGCTTTCTGCGTTACTCTGGAGGAATGTATCGGTGTAATGGATACATTTCCGAGTGGAGTAAATGTTCATACTCTACTTGTGAACCAAAACGTATTGAAGGGAAGTGGAAAATCCCAGAAGAAACAAACAATCAGTATCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAAACAGTTAGGATATTGCCTCTTCCATCTCCAAGGAAATCGGTCGAAAGTCAAATTACTGTTAGTCAGCATCAATCATCAAACAATGAAAATTTGCGAGATTTGAAAGTTTCTATCTATGGATTACCTAATGACTCTATTTATTTTGTACTCATCTCCTATGAGGGGACTTTACAGGAGAAATGGAAAAGCAAACTTGATGGCATAGGTGGGGTGTTTCATGCAAAAGTAAAGAAAGATACTAACTGCTTGGTGGTTGGTGGATCACTCAATGATGAAGCAGAGATGCGGAAGGCTAGGAGGATGAAAATACCAATAGTCAGAGAGGACTATTTGATTGACTGCATAGAAAGAAACAAGAGACTTCCATTTGATATGTACAAGGTTGAAATGATTGGTGAGGCTTCTAGCATGGTCACCATTAAAGTGAAGGGACATAGTGCTGTTCACGAGGCTTCTGGGCTACAGGATTCTGGCCACATACTTGAGGAAGGGAAAAGCATATATAACACAACTTTGAATATGTCCGATTTGTCTACTGGTATTAACAGCTACTACATTCTTCAGATAATCGAAGAAGATAAAGGGTCAGATTGCTATGTGTTTCGTAAATGGGGCCGAGTGGGAAATGACAAGATTGGAGGAACAAAACTGGAGGAAATGTCAAAATCTGATTCAATCTGTGAATTCAAACGATTATTCTATGAGAAGACTGGAAACCCTTGGGAGGCGTGGGAACAAAAGACTATTCAGAAGCAACCTGGAAGATTCTTCCCATTGGATATTGATTATGGAGTTAACAAACAGGTCTCCAAAAAGAAAAGAAATGATGCCGACAGCAAACTACCTACTCCATTAATAGAATTGATGAAGATGCTCTTCAATGTGGAAACATACAGAGCTGCCATGATGGAATTTGAGATTAATATGTCTGAAATGCCACTTGGGAAACTGAGCAAAAACAATATCCAAAAGGGGTTTGAAGCATTGACAGAGATACAAAATCTATTAAAAATTAGCAATCCTGATCCATCAGTCAAGGAAAGCTTACTTATTAGTGCCAGCAATCAGTTCTTCACCATGATCCCTTCTATTCATCCACATATTATTAGGGATGATGATGATTTTAAGTCCAAGGTGGTACCATTTTTCATTCATTTTTCAGTTTGGGGTTTGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCCTCAAGATTAGTTGGATTTGATGCCAACAATGATGACTCCATTGATGATAATTATAAGAAGCTCCATTGTGATATATCTCCACTTCCTCATGATAGTGAAGAGTTTTGTTTAATTGAGAAGTTTCTCCATAATACTCATGCCCCCACACATACGGAGTGGAGTCTTGAGCTAGAAGAAGTTTTTTCACTTGAAAGGGAAGGTGAATTTGATAAGTTTGCTCCTTACAGGGAGAAACTTGGAAACAGAATGCTCCTATGGCATGGTTCTAGGTTGACAAACTTTGTGGGCATTCTTAACCAAGGACTCAGAATTGCTCCTCCTGAAGCCCCAGCAACTGGCTATATGTTTGGCAAAGGGGTTTACTTTGCTGACCTGGTCAGCAAAAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCAGTTGGTCTAATGCTTTTGAGTGAGGTTGCGCTTGGAAATGTCTATGAGCTCAAGAAAGCTAAGTATATGGATAAACCTCCCGAAGGAAAGCACTCGACTAAAGGACTGGGCAAGAAAATGCCTCAGGAATCGGATTATGTAAAGTGGAGGGGCGATGTCACTGTTCCTTGTGGCAAACCAGTGCCATCAAATGTCAAGAGTTCTGAGCTCATGTACAATGAGTATATTGTTTATAATACTGCTCAAGTTAAGATGCAATTCTTGTTGAAGGTGAGGTTTCATCACAAGAGATGA 3171 0.4134 MRVKGGKSERESESESGSEFERMSNPQNQKPWKAEYAKSGRSSCRTCKSPIASETLRLGKMVQSSKFDGLMPMWNHAACILKKAKQIKLVEDVENLESLRWEDQQNIRKYIESGGGSGGGSSSGSGNVEKSNSKAVKDIECDIEVSKASRATCRDCGQKIIKGEVRISTKPDGQGAKSLGWHHAKCLMELSPSIQVDKLAGWNSLSSSDQSAVNDFAKKGRPMNKGGGSGTKIETKEGKESTQQQTSKGGIKRGKDVDSERKSKVAKAKGDVSAGSAVSVKNSNESGEACDLEKEMETQSKELWSLKDDLKKNVTTTELRVMLEANGHDSTGSELDLRDRCADGMMFGALALCPICSGFLRYSGGMYRCNGYISEWSKCSYSTCEPKRIEGKWKIPEETNNQYLKKWFKSQKGKKTVRILPLPSPRKSVESQITVSQHQSSNNENLRDLKVSIYGLPNDSIYFVLISYEGTLQEKWKSKLDGIGGVFHAKVKKDTNCLVVGGSLNDEAEMRKARRMKIPIVREDYLIDCIERNKRLPFDMYKVEMIGEASSMVTIKVKGHSAVHEASGLQDSGHILEEGKSIYNTTLNMSDLSTGINSYYILQIIEEDKGSDCYVFRKWGRVGNDKIGGTKLEEMSKSDSICEFKRLFYEKTGNPWEAWEQKTIQKQPGRFFPLDIDYGVNKQVSKKKRNDADSKLPTPLIELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKNNIQKGFEALTEIQNLLKISNPDPSVKESLLISASNQFFTMIPSIHPHIIRDDDDFKSKVVPFFIHFSVWGLVKMLEALQDIEIASRLVGFDANNDDSIDDNYKKLHCDISPLPHDSEEFCLIEKFLHNTHAPTHTEWSLELEEVFSLEREGEFDKFAPYREKLGNRMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKKAKYMDKPPEGKHSTKGLGKKMPQESDYVKWRGDVTVPCGKPVPSNVKSSELMYNEYIVYNTAQVKMQFLLKVRFHHKR 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0191 1056 Gene3D - 349 409 IPR038650 -
Aed4g0191 1056 Gene3D - 841 1056 - -
Aed4g0191 1056 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 29 117 - -
Aed4g0191 1056 MobiDBLite consensus disorder prediction 251 268 - -
Aed4g0191 1056 Pfam BRCA1 C Terminus (BRCT) domain 459 530 IPR001357 -
Aed4g0191 1056 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 141 221 IPR001510 GO:0003677|GO:0008270
Aed4g0191 1056 MobiDBLite consensus disorder prediction 215 293 - -
Aed4g0191 1056 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 72 1050 - -
Aed4g0191 1056 MobiDBLite consensus disorder prediction 1 18 - -
Aed4g0191 1056 Pfam Poly(ADP-ribose) polymerase catalytic domain 851 1052 IPR012317 GO:0003950
Aed4g0191 1056 ProSiteProfiles PARP alpha-helical domain profile. 693 824 IPR004102 GO:0003950
Aed4g0191 1056 SMART WGR_cls 583 666 IPR008893 -
Aed4g0191 1056 MobiDBLite consensus disorder prediction 116 131 - -
Aed4g0191 1056 ProSiteProfiles SAP motif profile. 311 345 IPR003034 -
Aed4g0191 1056 MobiDBLite consensus disorder prediction 110 131 - -
Aed4g0191 1056 Gene3D - 133 241 IPR036957 GO:0003677|GO:0008270
Aed4g0191 1056 Gene3D - 23 132 IPR036957 GO:0003677|GO:0008270
Aed4g0191 1056 SUPERFAMILY ADP-ribosylation 840 1055 - -
Aed4g0191 1056 CDD parp_like 694 1051 - -
Aed4g0191 1056 SMART BRCT_7 455 533 IPR001357 -
Aed4g0191 1056 ProSiteProfiles BRCT domain profile. 441 543 IPR001357 -
Aed4g0191 1056 CDD WGR_PARP1_like 573 678 - -
Aed4g0191 1056 ProSiteProfiles WGR domain profile. 572 671 IPR008893 -
Aed4g0191 1056 ProSiteProfiles PARP catalytic domain profile. 831 1056 IPR012317 GO:0003950
Aed4g0191 1056 SUPERFAMILY WGR domain-like 551 676 IPR036930 -
Aed4g0191 1056 MobiDBLite consensus disorder prediction 1 40 - -
Aed4g0191 1056 SMART zf_PARP_3 144 218 IPR001510 GO:0003677|GO:0008270
Aed4g0191 1056 SMART zf_PARP_3 35 112 IPR001510 GO:0003677|GO:0008270
Aed4g0191 1056 SMART PADR1_2 337 390 IPR012982 -
Aed4g0191 1056 Pfam PADR1 (NUC008) domain 339 388 IPR012982 -
Aed4g0191 1056 Gene3D BRCT domain 427 545 IPR036420 -
Aed4g0191 1056 Pfam WGR domain 583 661 IPR008893 -
Aed4g0191 1056 Gene3D - 683 840 IPR036616 GO:0003950
Aed4g0191 1056 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 32 115 IPR001510 GO:0003677|GO:0008270
Aed4g0191 1056 Pfam Poly(ADP-ribose) polymerase, regulatory domain 694 837 IPR004102 GO:0003950
Aed4g0191 1056 Gene3D - 276 348 - -
Aed4g0191 1056 PANTHER DNA LIGASE 72 1050 - -
Aed4g0191 1056 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 694 841 IPR036616 GO:0003950
Aed4g0191 1056 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 143 226 - -
Aed4g0191 1056 PIRSF NAD_ADPRT 25 1056 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Aed4g0191 1056 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 35 111 IPR001510 GO:0003677|GO:0008270
Aed4g0191 1056 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 144 215 IPR001510 GO:0003677|GO:0008270
Aed4g0191 1056 SUPERFAMILY BRCT domain 460 543 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0191 Aed-Chr4 1407682 1417140 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0191 K24070 - gmx:100800968 1823.14