Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0188 ATGGCGTTCTCTTCTTTTCTCGGCAGAGTCCTCTTCGCCTCCGTTTTCATCCTCTCTGCTTACCAAGAATTTAATGCTTATGGAGTTGATGGGGGACCCGCAGCAAAAGCACTCAGACCGAAGTTTGATGCCTTTGCACATCAAGTACATTCTAAAGTTGGCTTTCAACTTCCAGATATTGATATGAAATTTTTAGTTGCTGGGGCTATTGCTCTCAAGGGCGTTGGAGGGATTCTTTTCATACTTGGCAGCTCTTTTGGAGCTTCCCTTTTGCTTTTGCATCAAATGATCGCTACTCCAATACAGTATGATTTCTACAATTATGACAGCGAGGACAAAGAATCTATCCAACTTCTCATCAAATTTACTCAGAATATGGCTCTCTTCGGGGCTTTGTTGTTTTTCATTGGGATGAAAAACTCTATTCCTAGAAGGCAACCCAAGAAGAAGGCTCCCAAAACAAAAACCTATTAG 474 0.4177 MAFSSFLGRVLFASVFILSAYQEFNAYGVDGGPAAKALRPKFDAFAHQVHSKVGFQLPDIDMKFLVAGAIALKGVGGILFILGSSFGASLLLLHQMIATPIQYDFYNYDSEDKESIQLLIKFTQNMALFGALLFFIGMKNSIPRRQPKKKAPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0188 157 PANTHER HR-LIKE LESION-INDUCING PROTEIN 1 157 - -
Aed4g0188 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Aed4g0188 157 PANTHER - 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0188 Aed-Chr4 1383704 1386885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0188 - - gmx:100500514 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0188 4 1383704 1386885 Aed8g0207 8 1762889 1765349 PCT
Aed8g0903 8 7779673 7782500 Aed4g0188 4 1383704 1386885 PCT