Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0175 ATGGATATGGTGGAGAAGAAAGAAGGTGAAGCCGCCGCCCCCTTGTTCTGGTTCGAAACCTCTGACTCTGTCTGTTGTCGGCACCACTTTAAACCCGACGGTCGACTCTCCGTGGTGATTGTTGATGATTGTAGGTCTCTATACCAAAGGGTGGCTGGATCTTTCAGGAATAAATTTTTCCCCTCGGGATATCCATACAGTGTGAATGAAGGTTATCTTAGATACACGCAGTTTCGAGCTGTGCAACATGTTACCAGTGCAGCGCTATCGGTGCTATCAACTCAGTCGGCGTCCTTGGTCTCCATGCTTATTCTTCTGCAGTCCTTGCTATTTGCTGCAGGGTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGAATGCAACATGTAGGGAAGCTAATATGTAGCAATTGGGGTGCTAGAATGGATTCTGAGCCTGAACGTTGGAGACTCCTAGCCGATGTGCTCTACGATATAGGCATTGGCTTGGAAGTGCTTTCTCCATTATGCCCGCATCTTTTTCTTGAAATGGCAGGCTTAGGAAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGAGCAACAAGGTTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGTGACCTATTTGCTAAAGGAGAGGCTTTTTCAACTCTTTTTAATGCTATTGGAATTGGAGTTGGAATTCAATTAGCATCTACCTTTTGTTCATCAATGCAGGGAAAGTTTCTGACTCTTGGTTGTGGGTCCTCTCCTTTCAGTAATCATTTATATAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAGTACCTTGAATCCACGGAGAACTGCAATGGTTGTGGCTGATTTTCTCAAGGCAGGAGTTGTATCAAGCCCCGCCGATCTGAGATATAGAGAAAATCTTCTGTTCAATCTACACATCAAAGAAGATGCTGGAAATGTAAGAGTGGGGAAGGATGTGCACAAGGTCATTCAGCCTTCCAGGCTTCTTGAATTAAATGACATGGTGTTGGAGCAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAAATGAGAGTTCCTCTCATGAGCTCAGTGTTACTACTATTAGTGTGCTGCATGAGGCTTGTGAGAAAATGGATGGTGTCTTTCCTGTATTCTTAAAAGAATTGCAGAACAAAGGGTGGCACACTGATAGGTTTTTGGATGGAACTGGGAGCCGTTTTGCATTCTAG 1269 0.4452 MDMVEKKEGEAAAPLFWFETSDSVCCRHHFKPDGRLSVVIVDDCRSLYQRVAGSFRNKFFPSGYPYSVNEGYLRYTQFRAVQHVTSAALSVLSTQSASLVSMLILLQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPERWRLLADVLYDIGIGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNAIGIGVGIQLASTFCSSMQGKFLTLGCGSSPFSNHLYSVSEEMRATPISTLNPRRTAMVVADFLKAGVVSSPADLRYRENLLFNLHIKEDAGNVRVGKDVHKVIQPSRLLELNDMVLEQDASGEDALRGWLVAAYAAQNESSSHELSVTTISVLHEACEKMDGVFPVFLKELQNKGWHTDRFLDGTGSRFAF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0175 422 PANTHER PROTEIN ROOT UVB SENSITIVE 2, CHLOROPLASTIC 6 422 - -
Aed4g0175 422 Pfam Vitamin B6 photo-protection and homoeostasis 49 296 IPR006968 -
Aed4g0175 422 PANTHER RUS1 FAMILY PROTEIN C16ORF58 6 422 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0175 Aed-Chr4 1273780 1276719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0175 - - gmx:100820508 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0175 4 1273780 1276719 Aed4g0175 4 1273780 1276719 ECH
Aed4g0175 4 1273780 1276719 Aed8g0925 8 7976277 7979538 PCT