Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0163 ATGGGTTCTCTCCCTGCGCCAGCATTTCCATCCAAACACTGCCTTGACGAGAGCAGCCACATTGACGAAGCCAAGCTCACGGCGCTGTTCAAGTCGCAGCAGAGCCACCTGAACTTCTTCTTCGACCACATCGACCACTCCCAAACCCTGGCCTTCACGCGCGCGCTCCTCAACGCTGCTGGCACCGTCTTCTTCACCGGCGTCGGAAAATCTGGCTTCGTCGCGCACAAGATCTCGCAGACGCTCGTCTCTCTCGGCGTCCGCTCCGCTTTCCTCTCGCCGGTGGACGCTCTGCACGGCGACATTGGAATCCTCACCGATCGCGACGTGCTCGTCCTCCTCAGCAAGTCCGGCGCCACCGAGGAGCTCCTCCGCCTGGTGCCGTGCGCGAGGGCGAAGGGCGCGCTCCTCATCGCGCTCACCTCCGTCGAAGGCAACGCGCTTGCGGCGGCGTGCGACATGGCCGTGCATTTGCCGCTCCAGAGAGAGCTCTGTCCTTTCAACCTCGCGCCGGTCACATCCACCGCCATTCAGATGGTGTTCGGCGACACCGTCGCCATCGCACTCATGGAGGCCAGGAATCTCTCCAAGGAGGAGTACGCCGCGAACCATCCCGCCGGCAAGATCGGGAAGAGCCTCATCTTCAAGGTGAAGGATGTGATGAAGAAACAGGATGAGCTTCCAATTTGCAGAGAATCGGATTTGATTATGGATCAGCTTGTGGAACTCACGACTAAAGGATGCGGATGTCTCCTTGTTATCGATGACGATCACCGTCTGATGGGAACGTTCACCGACGGTGATCTCCGTCGCACTCTCCGAGCCAGTGGAGAAGCCATTTTCAAACTCACTGTTGGGAAAATGTGCAACCGGAATCCGAGAATTATTGGTCCGGAGGCAATGGCGGTGGATGCAATGAAGAAGATGGAGGCACCTCCATCGCCGGTTCAGTTTTTGCCTGTGATAAACGATGAAAATATCTTGATTGGGATTGTGACCTTGCATTGTTTGGTTTCAGCTGGCTTGTGA 1029 0.5724 MGSLPAPAFPSKHCLDESSHIDEAKLTALFKSQQSHLNFFFDHIDHSQTLAFTRALLNAAGTVFFTGVGKSGFVAHKISQTLVSLGVRSAFLSPVDALHGDIGILTDRDVLVLLSKSGATEELLRLVPCARAKGALLIALTSVEGNALAAACDMAVHLPLQRELCPFNLAPVTSTAIQMVFGDTVAIALMEARNLSKEEYAANHPAGKIGKSLIFKVKDVMKKQDELPICRESDLIMDQLVELTTKGCGCLLVIDDDHRLMGTFTDGDLRRTLRASGEAIFKLTVGKMCNRNPRIIGPEAMAVDAMKKMEAPPSPVQFLPVINDENILIGIVTLHCLVSAGL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0163 342 ProSiteProfiles CBS domain profile. 289 342 IPR000644 -
Aed4g0163 342 CDD CBS_pair_SIS_assoc 213 335 - -
Aed4g0163 342 ProSiteProfiles SIS domain profile. 52 195 IPR001347 GO:0097367|GO:1901135
Aed4g0163 342 ProSiteProfiles CBS domain profile. 221 280 IPR000644 -
Aed4g0163 342 PIRSF KdsD_KpsF 11 342 IPR004800 GO:0005975|GO:0016853
Aed4g0163 342 PANTHER - 1 342 - -
Aed4g0163 342 Pfam SIS domain 57 187 IPR001347 GO:0097367|GO:1901135
Aed4g0163 342 CDD SIS_Kpsf 61 188 IPR035474 -
Aed4g0163 342 Gene3D - 212 340 IPR046342 -
Aed4g0163 342 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 61 332 IPR004800 GO:0005975|GO:0016853
Aed4g0163 342 Pfam CBS domain 217 273 IPR000644 -
Aed4g0163 342 Pfam CBS domain 285 335 IPR000644 -
Aed4g0163 342 SUPERFAMILY SIS domain 35 341 IPR046348 GO:0097367|GO:1901135
Aed4g0163 342 Gene3D - 21 211 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0163 K06041 - gmx:100805755 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0163 4 1199994 1201669 Aed4g0163 4 1199994 1201669 ECH