Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0160 ATGGCAAGCATGGCAAAAGGAAGAGCAGATGTGAACTCCAGAAAAAAATTGGTCATAACTGTGTTGGTTTTAGTGATTCTTGGTGGTTTTTTCTACTTCTATTCTCAGAATAGTGATTCATCTTCTGTTGAGTATGGCGATAATAATAAATCTTTGAAAAAAATTGGTTTGGGAGAGGACAAAGATGATGGTGAATCTTCTTCCTCCATAGTTGTTGGAGGAGAGGACAGTGCTGTTGTACCAAAGAGCATTCCAGTCTGTGATGATCGTCTATCGGAGCTGATTCCTTGTTTGGATAGACACCTCATATACCAAACAAGATTGAAGCTTGATTTATCTTTGATGGAGCACTATGAGAGACACTGTCCAGCACCTGAGAGGAGATTTAATTGTTTAATTCCTCCTCCTCCAGGGTACAAGATGCTCAATTTTCCAAACAATAATATAAACAATGGGGGAAGAATCAGGTCTGTTCTTGATGTTGGCTGTGGGGTTGCTAGCTTTGGTGGATATCTTCTTTCTTCAAATGTGATAGCAATGTCACTGGCACCAAATGATGTTCATCAAAATCAAATCCAGTTTGCATTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTGGGGACCCTAAGGCTCCCTTATCCAAGTAGATCATTTGAACTTGCTCATTGCTCTCGCTGTCGAATCGATTGGCTTCAGAGAGATGGTATACTTCTCCTTGAGCTGGATAGGTTACTCAGACCAGGAGGTTATTTTGCATACTCATCTCCTGAAGCCTATGCACATGATGAAGAGGACAGGAGGATATGGAGAGAAATGAGTGCTCTTGTGGAGAGGATGTGCTGGAAAATAGCTGCTAAGAAGGATCAGACTGTTGTTTGGGTCAAGCCTCTCACAAATAGCTGCTACTTAAAGAGATTGCCTGGTACCAAGCCTCCACTCTGCAAATCTGATGATGATCCTGATGCTGTTTGGGGAGTCCATGTTGTCCCTAGGTATGATATACACAACAAAACCACAGCATTGTTGCATGTTGCACTAGCAATTGCTGTAAAAGTTTGGCGACAACGAGTTCACAATTACTGGAGCAAACTAGACAGTAAGATTAAGCCAGACAACATTCGGAACGTGATGGATATGAAGGCAAATTTGGGTTCTTTTGCAGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTACCAGAAAATGAACAAAAAACACTCGAGATAGTATACGACAGAGGACTGATAGGAACAGTTCACAGCTGGTGTGAAGCTTTTTCAACCTACCCTCGAACGTATGATTTACTCCATGCATGGACTGTGTTTTCTGACATTATTAAGAAAGGATGCAGTGCAGAGGATTTATTAATTGAGATAGATAGAATCCTGAGGCCAAAGGGTTTCATCATTGTCCATGATAAGCGGTCAGTGGTGGAGTACATAAAGAAATACTTGCCAGCATTACACTGGGAGGCTGTGACCATGTATGATGTAGATGATGAAGCAGTGTTTATAATTCAAAAGAAGATGTGGCTCACAAGTGAAGCAGTGTCATAA 1566 0.4144 MASMAKGRADVNSRKKLVITVLVLVILGGFFYFYSQNSDSSSVEYGDNNKSLKKIGLGEDKDDGESSSSIVVGGEDSAVVPKSIPVCDDRLSELIPCLDRHLIYQTRLKLDLSLMEHYERHCPAPERRFNCLIPPPPGYKMLNFPNNNINNGGRIRSVLDVGCGVASFGGYLLSSNVIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAHDEEDRRIWREMSALVERMCWKIAAKKDQTVVWVKPLTNSCYLKRLPGTKPPLCKSDDDPDAVWGVHVVPRYDIHNKTTALLHVALAIAVKVWRQRVHNYWSKLDSKIKPDNIRNVMDMKANLGSFAAALKDKDVWVMNVVPENEQKTLEIVYDRGLIGTVHSWCEAFSTYPRTYDLLHAWTVFSDIIKKGCSAEDLLIEIDRILRPKGFIIVHDKRSVVEYIKKYLPALHWEAVTMYDVDDEAVFIIQKKMWLTSEAVS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0160 521 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 9 141 IPR004159 GO:0008168
Aed4g0160 521 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 351 520 IPR004159 GO:0008168
Aed4g0160 521 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 141 329 IPR004159 GO:0008168
Aed4g0160 521 Gene3D Vaccinia Virus protein VP39 148 294 IPR029063 -
Aed4g0160 521 PANTHER METHYLTRANSFERASE PMT1-RELATED 141 329 - -
Aed4g0160 521 PANTHER METHYLTRANSFERASE PMT1-RELATED 9 141 - -
Aed4g0160 521 PANTHER METHYLTRANSFERASE PMT1-RELATED 351 520 - -
Aed4g0160 521 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 351 508 IPR004159 GO:0008168
Aed4g0160 521 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 141 IPR004159 GO:0008168
Aed4g0160 521 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 147 329 IPR004159 GO:0008168
Aed4g0160 521 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 348 505 IPR029063 -
Aed4g0160 521 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 290 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0160 Aed-Chr4 1160040 1165703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0160 - - gmx:100805403 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0160 4 1160040 1165703 Aed4g0160 4 1160040 1165703 ECH
Aed4g0160 4 1160040 1165703 Aed8g0190 8 1649475 1654527 PCT
Aed8g0938 8 8161966 8165937 Aed4g0160 4 1160040 1165703 PCT