Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0148 ATGGAAGGGAGAGAGAGTTGTCACCCATTGCTGAGAGGTGGTAGGAGAAGAGAGGAGAAAGGTTACAAGCATGGCTTATCCACCACTCAGATGCATGTCATGGCCGCAATATGTGATGCCCTATTTCCTTCTCTCCCTTTTAACAACAATTCACAGGACCAAACTCTCTCAGACTTCTACAATACCTCTGCTTCTCAGCTCCCTGTTCCTGATGAGGCTGCAGAGCTGTTGTACAAGAGGGTTGTGCCAGAAGCAGTGTCTTTGATGAGTTGGGTTCTGTGGATACTGTCTTTCAGATTAGGGACACTGTTGCTCTGTGGAAGACTTTGCTTGGACTGGAACTGGCCTTTCATTCACAAGTTCTCCGAGATTTCCTTGGAGAAGAGAGAAGAGATTCTCAGGAACTGGTCCAGGGAAAAGAATTGGGCAGCCCTAAGGGTAGTGTTTGTGCTCATCAAACTTTTTTGCTTCTATAATTTCTTCTCAAGGACTGATGCAAATGGGAATAATCCCACATGGAAAGCAATTGGATACAGGGTGGATACTAAGGAAAAGTTGATACGAAAAGAGAGGCCTTTGGAAAAGGGACTAATAGAGACAATGTACGAAACTGATTCTACTTTAATCCAATCCCTCACTGAAAAAGGCCTTGAAGTCACTGAAGACAAAAGGCAGAACCTTTACAAGGTAAAATGCGATGTTGTGATTGTGGGGTCTGGTTGTGGTGGAGGAGTTGCAGCCGCAGTTCTTGCAAACTCTGGCCATAAAGTAATAGTCTTAGAGAAAGGAGAGTACTTTGTTTCCAATGATTACTCTTCCCTGGAAGGTCCATCCATGGAGGAGTTATATGAAGCAGGTGGCATCATGCCAAGTATTTGTGGGAAAATGATGATTCTGTCTGGCTCAACAGTGGGTGGAGGATCTGCTATAAACTGGTCTGCATCCATCAGAACACCAGATTCTAAATGCTTAGGAGTGATTGCTGCAGCAAGTTGGAGGAGCAAGGTAACAAAGAAGCTCCAAATTGAGTCCAGGGTAACAATCTCAGCATGTGGCTCTCTCAACACTCCTCCTCTAATGATCTCTAGTGGACTTAAGAATCCAAACATTGGAAGGAACCTCCACCTCCACCCTGTTCAATTTGCATGGGGCTACTTCCCAGAAGGCATCACCAACTTCAGTGGCAACAGCTACGAGGGCGGAATCATCACCTCGATCCACAAGGAGTTGGCAGAGGATTCAACACCAAGATTTATTATAGAAACACCGTCTCTAGGGCCAGGATCGTTCTCTGCACTTGTTCCATGGCTCTCGGGGCGCGACATGAAGGACAGGATGGGGAAGTATGCAAGAACTGCCAACATTTTTGCATTGGTGAGAGATCAGGGATCAGGAGAAGTGAAGGCTGAAGGGAGAGTTAGTTATAGATTTGAGAAATCAGACAAAGAGAGTCTCAGAGTTGGACTGAGGATGGCACTGAGGATTTTGGTTGCAGCAGGTGCTGAGGAAGTTGGAACATACAGAAGTGATGGCCAGAGAATGAAGTGTGAGGGGATCAAGGAGGAAGAGTTGGAGGAGTTTCTTGACACTGTGGCAATAGTTGGGGGTCCAAGGTCAAGGAATGAAGTGTGGACAGTGTTTACCTCTGCACATCAAATGACAAGTTGTAGAATGGGAGCCACTGAGGAAGAAGGTGCACTTGATGAGAATGGTGAGAGTTGGGAAGCAAAAGGGTTGTTTGTGTGTGATGGGAGTGTGTTTCCTAGTGCAGTTGGTGTTAATCCTATGTTAACCATTCAGTCTACATCTTACTGTATTGCCACTAAGATTGCAGAATCACTTAGCAATGCATGA 1854 0.4563 MEGRESCHPLLRGGRRREEKGYKHGLSTTQMHVMAAICDALFPSLPFNNNSQDQTLSDFYNTSASQLPVPDEAAELLYKRVVPEAVSLMSWVLWILSFRLGTLLLCGRLCLDWNWPFIHKFSEISLEKREEILRNWSREKNWAALRVVFVLIKLFCFYNFFSRTDANGNNPTWKAIGYRVDTKEKLIRKERPLEKGLIETMYETDSTLIQSLTEKGLEVTEDKRQNLYKVKCDVVIVGSGCGGGVAAAVLANSGHKVIVLEKGEYFVSNDYSSLEGPSMEELYEAGGIMPSICGKMMILSGSTVGGGSAINWSASIRTPDSKCLGVIAAASWRSKVTKKLQIESRVTISACGSLNTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEGITNFSGNSYEGGIITSIHKELAEDSTPRFIIETPSLGPGSFSALVPWLSGRDMKDRMGKYARTANIFALVRDQGSGEVKAEGRVSYRFEKSDKESLRVGLRMALRILVAAGAEEVGTYRSDGQRMKCEGIKEEELEEFLDTVAIVGGPRSRNEVWTVFTSAHQMTSCRMGATEEEGALDENGESWEAKGLFVCDGSVFPSAVGVNPMLTIQSTSYCIATKIAESLSNA 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0148 617 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 4 321 - -
Aed4g0148 617 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 322 616 - -
Aed4g0148 617 Gene3D - 217 335 IPR036188 -
Aed4g0148 617 SUPERFAMILY FAD/NAD(P)-binding domain 231 615 IPR036188 -
Aed4g0148 617 Pfam GMC oxidoreductase 321 379 IPR000172 GO:0016614|GO:0050660
Aed4g0148 617 Gene3D - 518 617 IPR036188 -
Aed4g0148 617 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 4 321 - -
Aed4g0148 617 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 322 616 - -
Aed4g0148 617 PIRSF Lg_Ch_AO 320 617 IPR012400 GO:0046577
Aed4g0148 617 PIRSF Lg_Ch_AO 13 321 IPR012400 GO:0046577
Aed4g0148 617 Pfam GMC oxidoreductase 472 603 IPR007867 GO:0016614
Aed4g0148 617 Pfam FAD binding domain 233 268 IPR003953 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0148 Aed-Chr4 1082920 1086693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0148 297 616 Acyl Lipid Metabolism Gene Families AT4G28570 61.250 3.39e-130 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0148 K17756 - gmx:100808951 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0148 4 1082920 1086693 Aed4g0148 4 1082920 1086693 ECH