Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0143 ATGGCAGTGATAGAAGAAAAAGGTCCTGCAAGTGGGAACGAAGATTACACCCAAGATGGCACAGTGGACATAAAGGGGTATGAAGTGTTTGAGAGGATGGCTTTCTATGGTATTCAATCAAACCTAGTGATATATCTAACTACGAAGCTCCATCAGGGCACTGTGACTGCTTCAAACAATGTTAGCAACTGGGTGGGTTCAGTGTGGATGATGCCACTTGCTGGAGCTTACATAGCCGATGCCTATCTTGGCCGATATAGGACATTTGGAATGTGTCTGTTGACTCTGACAGTTTCATTACGAGCACTGAGGCCACCAGCATGTGAAGAAGGGCAGAATTGCCCACGAGCATCGTCATTGCAATTTGGTGTTTTCTTCTTGGCCCTTTACATCATTGCAATAGGCACAGGTGGAACCAAGCCCAACATTTCCACCATGGGAGCAGACCAATTTGATGAGTTTGAACCCAAAGAGAGGTCCCACAAGCTCTCCTTCTTCAATTGGTGGTTTTTTAGTATCTTCTTTGGTACCCTTTTCTCCAACACTTTCTTGATTTATATACAAGACAATGTGGGTTGGACCATTGGGTATGGCCTTCCCACCCTTGGGCTTTCTGTTTCAGTATTGGTGTTTCTGGTTGGAACTCCATTTTATAGGCACAAATTGCCCTCAGGTAGCCCAATTACAACGATGCTTCAGGTGTATGTTGCTACTGGGAGGAAGTGGAAGCTACATGTCCCAGATGATCCAAAAGAGCTACATGAGCTCAGCATTGAAGAGTATGAAAGTTGTGGGAGACATAGAATTGATAAGAGCTCTTCATTGAGTTTCCTTGACAAAGCGGCTATAAAGACAGGCCAAACATCACCATGGGTGGTTTGCACAGTGACCCAAGTAGAAGAAACCAAGCAAATGACAAAACTGCTCCCTATTCTGCTCACAACGATTATACCAAGCACCTTGATAGTTCAAGCAAGCACACTCTTCATCAAACAAGGCGTCACACTAGACAGGAGAATGGGACCCCATTTCCAGATCCCCCCAGCATGTCTCAATGCATTTGTAACCATCTCCATGCTGATCACCATCGTTGTCTACGACCGCGCCTTCGTCCCCGCGATCCGCCGCTACACGAAGAACCCCAGAGGGATCACAATGCTGCAGAGACTCGGCATTGGACTCGTGCTTCATGTCATCATAATGGTCGTTGCATGCTTTGCTGAAAGAAAGAGACTTGAGGTTGCGAGAGAGAATCACCTCTTTGGCTTGCATGACACGATTCCTCTCACTATTTTCATCCTTCTGCCTCAGTATGCTTTGGGAGGGGTTGCTGATAACTTTGTTGAAGTTGCCAAGATTGAGATTTTCTATGACCAAGCTCCTGAAGGCATGAAGAGTCTTGGAACGGCGTATTTCACGACCACCTTGGGTGTTGGGAGTTTTCTCAGCAGTTTTCTTCTGTCAACTGTTGCTGATGTCACCAAGAGACATGGCCACAGTGGTTGGGTTTTGGATAATCTAAACGTCTCTCGTTTGGATCTTTATTATGCATTCATGGCTGTACTCAGCTTTCTCAACTTTCTCTGCTTTTTGGTTGCTGCCAAGTTCTTTGTTTATAATGTTGATGTATCACAAACCAAATCGGGCTCGGAGATTAGCACCGATTCATCACAGAAACAGAACAATACTGGAATAAGCCCAAGGATACCACAACCAGATGGCAAGTCCTAG 1731 0.4552 MAVIEEKGPASGNEDYTQDGTVDIKGYEVFERMAFYGIQSNLVIYLTTKLHQGTVTASNNVSNWVGSVWMMPLAGAYIADAYLGRYRTFGMCLLTLTVSLRALRPPACEEGQNCPRASSLQFGVFFLALYIIAIGTGGTKPNISTMGADQFDEFEPKERSHKLSFFNWWFFSIFFGTLFSNTFLIYIQDNVGWTIGYGLPTLGLSVSVLVFLVGTPFYRHKLPSGSPITTMLQVYVATGRKWKLHVPDDPKELHELSIEEYESCGRHRIDKSSSLSFLDKAAIKTGQTSPWVVCTVTQVEETKQMTKLLPILLTTIIPSTLIVQASTLFIKQGVTLDRRMGPHFQIPPACLNAFVTISMLITIVVYDRAFVPAIRRYTKNPRGITMLQRLGIGLVLHVIIMVVACFAERKRLEVARENHLFGLHDTIPLTIFILLPQYALGGVADNFVEVAKIEIFYDQAPEGMKSLGTAYFTTTLGVGSFLSSFLLSTVADVTKRHGHSGWVLDNLNVSRLDLYYAFMAVLSFLNFLCFLVAAKFFVYNVDVSQTKSGSEISTDSSQKQNNTGISPRIPQPDGKS 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0143 576 MobiDBLite consensus disorder prediction 549 576 - -
Aed4g0143 576 CDD MFS_NPF5 24 539 IPR044739 GO:0042937|GO:0042938|GO:0071916
Aed4g0143 576 Gene3D MFS general substrate transporter like domains 9 545 IPR036259 -
Aed4g0143 576 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 24 550 - -
Aed4g0143 576 Pfam POT family 88 503 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed4g0143 576 SUPERFAMILY MFS general substrate transporter 36 534 IPR036259 -
Aed4g0143 576 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 24 550 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed4g0143 576 MobiDBLite consensus disorder prediction 549 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0143 Aed-Chr4 1035582 1038452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0143 4 562 Organic Solute Cotransporters AT5G46040 56.081 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0143 - - gmx:100807002 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0143 4 1035582 1038452 Aed4g0143 4 1035582 1038452 ECH