Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0140 ATGACAACTTTTCAAAAGGTTCATGCTCTTCTCTGTCATATACTCTTCTTCATAGCTTTGCTTCCATTGAAAATCACTTCATCACAAAGAACAGAAGCAGAAGCCCTTGTCAAATGGAAAAACAGTTTATCCCCTCCCCTCCCTCCGTCTCTAAACTCATCATGGTCCCTCACAAACCTTGACAACCTTTGCAATTGGGATGCCATTGTTTGTGACAACACTAACACAACAGTCTCACAGATAAACTTGTCTGGTTCCAATCTCAGTGGGACTCTCACTGCCTTGGATTTTGCTTCCTTACCTGACCTCACCCAAGTCAACCTCAATCTCAATAAATTTAAAGGGTCAATACCATCAACAATTGGCAATCTCTCCAAACTCACTTTATTGGACTTGGCTAATAACTTATTTGAAGACACACTGCCTTATGAGGTAGGCCAGCTAAGGGAGCTTCAATATCTAAGTTTGTACAACAACAATCTCAATGGAACCATTCCTTATCAGCTCATGAATCTCCCTAAGGTATGGTACATGGACCTTGGCTCTAACTACTTTATAACTCCTCCTGACTGGTCTAAATATTCATGCATGCCTTCCTTAACTCGCCTTGGTTTCCATCTCAATCCATTATTCATTGGCGAATTCCCAAGTTTCATACTGGAGTGCCACAACTTGACATACCTTGACATCTCTCAGAGTCACTGGAATGGTACAATACCAGAATCCATGTATAGCAATTTGTCCAAGCTGGAATACCTCAACCTCACCAACACATGGTTAGAAGGAAAACTGTCACCCAACTTGTCCATGCTTTCTAATCTCAAAGAACTTCGTATAGGTAATAACATGTTTAATGGTTCTGTTTCTACTGAGATAGGGTTGATATCTGGGCTTCAAATTCTTGAATTGAATAACATTTCTGCCAATGGGAAAATTCCTTCTTCCTTAGGCCAACTCAAGGAGCTAAGGCATCTTGATCTTAGTGTAAATTTTCTCAACTCTACAATCCCTTCTGAGCTTGGCCTATGCACAAATCTATCTTTCTTGAGCTTAGCAATGAATAGTTTGTCTGGTCATTTGCCGTTGTCATTAGCTAATCTGGCTAAAATATCAGAATTGGGATTATCAGATAATTCCTTTTCTGGTCAACTTTATGCTTCACTCATCTCAAATTGGACCCAATTGATCTCTCTGCAACTCCAAAACAATAAATTTACGGGAAACATTTCTCCACAGATTGGCCTGTTGAAAAAAATTGACATCCTCTATCTGTACAATAATCTGTTCTCTGGTCCCATTCCTGCAGAGATTGGAAACCTCAAGGAAATGACACAGTTAGATCTTTCAGAAAACGGATTCTCTGGTCCAATTCCATCAACTCTTTGGAATATGACAAACATTCATATCATGAAGCTTTGCTTCAATGAGCTCTCTGGAACCATTCCCATGGATATTGGAAACTTGACCTCAGTGGAAACCTTTGATGTCAACACCAATAACTTGAATGGGGAGTTGCCAGAAACCATTAATCAACTGCCAGCTTTAAGCCATTTTTCTGTGTTCACCAATAACTTCTCTGGCAGCATTCCCAGAGAATTTGGAAAGAATAATCCTTTGACTTATGTCTACCTTTCAAACAACAGCTTCTCTGGAGAACTACCTCCTGACTTGTGCAGTGATGGCATGCTAATTGAATTGGCAGTCAATAACAACAGCTTTTCAGGGTCATTGCCAAAGTCCTTGAGAAATTGTTCATCACTATCTAGGGTTCAGCTAAATGATAACCAGTTCACTGCAAACATCACAGACGCATTTGGGGTACTCCCAAATCTTTCTTATATTTCACTTAGTAGAAATCAGCTGGTTGGTGAGCTCACCCCGGAGTGGGGTGAATGTGTCAGCTTAACTCGGATGGATATGGAAAGCAACAAACTATCTGGAAAAATTCCATCTGAACTAAGTAAGTTGAGTCAATTAGAGTATCTAAGCCTGCACTCCAATGAATTCACTGGCAATATTCCACCTGAAATTGGGAATTTAAGCCTGCTTTTCATGTTCAACTTGAGTAGTAACCATTTATCAGGAGAAATCCCAAAGAGTTATGGCAGATTGACTAAGCTAAATCGTCTTGATTTATCAAATAACAACTTCAGTGGAAGCATTCCTAGAGAGCTCAGTGATTGTGGTGGCTTACTGAGTCTGAACTTAAGCAATAACAATCTATCCGGGGAGATACCATATGAACTTGGCAATCTCTTCTCGCTCCAAATCATGGGTAGATTAGCAGAAGCAGTAGTGTTCACAGTGACCATTGCTTTAGCCTGCACACGTGCGGCTCCAGAATCTAGACCTGTGATGCGTGCTTTGGCACAACAATTGTCGCTGTTAGCTACTACGCAGGCTTGTCTCTCCGAGCCATTTGGGACGATAACCATGAGCAAGCTTACAGGGTTCGGGTTCCACAAATAG 2469 0.4083 MTTFQKVHALLCHILFFIALLPLKITSSQRTEAEALVKWKNSLSPPLPPSLNSSWSLTNLDNLCNWDAIVCDNTNTTVSQINLSGSNLSGTLTALDFASLPDLTQVNLNLNKFKGSIPSTIGNLSKLTLLDLANNLFEDTLPYEVGQLRELQYLSLYNNNLNGTIPYQLMNLPKVWYMDLGSNYFITPPDWSKYSCMPSLTRLGFHLNPLFIGEFPSFILECHNLTYLDISQSHWNGTIPESMYSNLSKLEYLNLTNTWLEGKLSPNLSMLSNLKELRIGNNMFNGSVSTEIGLISGLQILELNNISANGKIPSSLGQLKELRHLDLSVNFLNSTIPSELGLCTNLSFLSLAMNSLSGHLPLSLANLAKISELGLSDNSFSGQLYASLISNWTQLISLQLQNNKFTGNISPQIGLLKKIDILYLYNNLFSGPIPAEIGNLKEMTQLDLSENGFSGPIPSTLWNMTNIHIMKLCFNELSGTIPMDIGNLTSVETFDVNTNNLNGELPETINQLPALSHFSVFTNNFSGSIPREFGKNNPLTYVYLSNNSFSGELPPDLCSDGMLIELAVNNNSFSGSLPKSLRNCSSLSRVQLNDNQFTANITDAFGVLPNLSYISLSRNQLVGELTPEWGECVSLTRMDMESNKLSGKIPSELSKLSQLEYLSLHSNEFTGNIPPEIGNLSLLFMFNLSSNHLSGEIPKSYGRLTKLNRLDLSNNNFSGSIPRELSDCGGLLSLNLSNNNLSGEIPYELGNLFSLQIMGRLAEAVVFTVTIALACTRAAPESRPVMRALAQQLSLLATTQACLSEPFGTITMSKLTGFGFHK 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0140 822 Gene3D Ribonuclease Inhibitor 29 190 IPR032675 -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 444 625 - -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 31 185 - -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 268 383 - -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 627 755 - -
Aed4g0140 822 Gene3D Ribonuclease Inhibitor 486 759 IPR032675 -
Aed4g0140 822 SUPERFAMILY RNI-like 81 382 - -
Aed4g0140 822 Gene3D Ribonuclease Inhibitor 191 485 IPR032675 -
Aed4g0140 822 SUPERFAMILY L domain-like 631 755 - -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 444 625 - -
Aed4g0140 822 SUPERFAMILY L domain-like 389 650 - -
Aed4g0140 822 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 268 383 - -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 627 755 - -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 195 307 - -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 582 682 - -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 582 682 - -
Aed4g0140 822 SMART LRR_typ_2 440 464 IPR003591 -
Aed4g0140 822 SMART LRR_typ_2 319 343 IPR003591 -
Aed4g0140 822 SMART LRR_typ_2 704 728 IPR003591 -
Aed4g0140 822 SMART LRR_typ_2 656 680 IPR003591 -
Aed4g0140 822 SMART LRR_typ_2 124 148 IPR003591 -
Aed4g0140 822 SMART LRR_typ_2 488 512 IPR003591 -
Aed4g0140 822 SMART LRR_typ_2 608 632 IPR003591 -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 390 581 - -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 31 185 - -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 390 581 - -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 195 307 - -
Aed4g0140 822 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 659 756 - -
Aed4g0140 822 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE IRK-RELATED 659 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0140 Aed-Chr4 1021016 1024843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0140 1 767 Receptor kinase-like Gene Family AT5G46330 32.587 6.13e-100 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0140 - - gmx:100786462 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0140 4 1021016 1024843 Aed4g0140 4 1021016 1024843 ECH