Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0139 ATGACAACTTTTCAAAAGCTTCATGCTCTTGTCTTTCATATACTCTTCTTCGTATCTTTGCTTCCAATGAAAATCACTTCATCACAAAGAACAGAAGCAGAAGCCCTTGTCAAATGGAAAAACAGTCTATCCCCACCTCTTCCTCCGTCTCTAAACTCATCATGGTCCCTCACAAACCTTGACAACCTTTGCAATTGGGATGCCATTGTTTGTGACAACACTAACACAACAGTCTCACAGCTACACTTGTCTGGTTCCAATCTCAATGGGACTCTCACTGCCTTGGATTTTTCTTCCCTACCTAAACTCACCCAACTCAATCTCAGTGGCAACAATTTTGAGGGGTCAATACCATCAGCAATTGGTAACCTCTCCAAGCTAACTTTGTTAGACTTGGGTTACAACAATCTCAATGGCACCATTCCTTATGAGCTAGGCCAGCTCAGAGAGCTGTGGCATCTTGATCTCAGTCAGAATATTTTGAACTCTACAATCCCTTCTGAAATTGGCCTATGCACAAATCTAACCTTCTTGAGTTTAGCAGGGAACAGTTTGACTGGTCCTTTGCCTATGTCTAATCTGGCTAAAATATCAGAACTGGGATTATCAGATAATTCCTTTTCTGGTCAACTTTCTGCTTCCCTTATCTCTAATTGGACCCAATTGATTTCCTTGCAAATCCAAAACAATAATTTTACTGGAAATATTCCTCCACAGATTGGCCTGAATCTGTTCTCTGGTGACATTCCTGTAGAGATTGGAAACCTGAAGGAAATTACACAGTTAGACCTTTCACAAAACGGATTCTCTGGTCCAATTCCATCAACACTTTGGAATCTGACGAACATTCAAGTCATGAATCTTTTCTTCAATGAACTCTCTGGAACCATTCCCCCTGATATTGGAAACCTAACCTCACTGCAAATCTTTGATGTCAGCACCAATAACTTGCATGGGGAGTTGCCAGAGACCATTGCTCAACTAACTTCTTTAGAAATTTTTTCTGTGTTCACCAACAACTTCACAGGCAGCATTCCCAGAGAATTTGGAAAGAGTAATCCTGATTTGACAAATGTTTACCTTGCATACAACAGGTTCTCTGGAGAACTTCCTCCTGACTTGTGCAGTGATGGCATGCTAACTATTTTGGCAGGTCAAAACAACAGCTTTTCAGGGCCATTGCCAAAGTCCTTGAGAAATTGTTCATCACTATTTAGAGTCCGGCTTGATGATAACCACTTCAGTGGAAACATCACAGATGCATTTGGGGTACTTCCAAATCTTATTTTTATCTCACTTGCTGGAAATCAGCTTGTTGGTGAGCTCTCCCCAGAGTGGGGTGAATGTTTCAATTTAACTGAGATGGAAATGGGAAGCAACAAACTTTCTGGAAAAATTCCATCTGAGTTGAGTAAGTTGAGTCAATTAAGGCATCTGAGTCTGCATTCCAATGAATTCACTGGCAACATCCCACCTGAAATTGGAAACCTAAGCCAACTTTTATTGTTCAACTTGAGTAGTAACCATTTATCCGGAGAAATCCCAAAGAGTTATGGAAGACTGGGTCAGCTAAATAGTCTAGATTTATCAAATAACAACTTCAGTGGAAGCATTCCTAGAGAGCTCGGTGATTGTTCTCACTTACTGAGCCTGAATTTAAGCCATAACAATCTATCTGGGGTGATACCATATGAACTTGGCAATCTGGTCACACTCCAAATCATGTTGGACCTCAGCAACAACTCTCTTTCTGGAGCTATTCCCTCAAACCTTGGAAAGTTAGCATCGTTGGAGATTCTCAATGTCTCACACAACCATCTATCATGGACAATTCCACGATCATTTTCAAGCATGCTCAGCCTTCAATCTATTGATTTTTCTTACAACAACTTGAGTGGTTCAATCCCCACCGGCCGTGTTTTCCAAACAGCAACTGCTGAAGCCTATGTTGGGAACTCAGGTTTGTGTGGTGATGTAAAAGGATTAACTTGTCCCAAATTGTTTTCCCTAGACAAATCTGGAGGGGTTAACAAAAAGGTTCTTCTTGGTGTTATCATACCAGTTTGTGTCTTATTCATTGGGATGATTGGTGTTGGAGTCCTACTATGCCGGTGGCATGCCAAGAAACGCCTTGATGAAGAACCCGTGATGCGCGCTGTGGCACAGCAACTGGCGTTGGCTACTACGCATGCTTGCGTCACCGAACCATTTGGCATGATAACCATAAGCAAGCTTACAGGGTTCAACAGTAGGACTGTCGCATAA 2265 0.4177 MTTFQKLHALVFHILFFVSLLPMKITSSQRTEAEALVKWKNSLSPPLPPSLNSSWSLTNLDNLCNWDAIVCDNTNTTVSQLHLSGSNLNGTLTALDFSSLPKLTQLNLSGNNFEGSIPSAIGNLSKLTLLDLGYNNLNGTIPYELGQLRELWHLDLSQNILNSTIPSEIGLCTNLTFLSLAGNSLTGPLPMSNLAKISELGLSDNSFSGQLSASLISNWTQLISLQIQNNNFTGNIPPQIGLNLFSGDIPVEIGNLKEITQLDLSQNGFSGPIPSTLWNLTNIQVMNLFFNELSGTIPPDIGNLTSLQIFDVSTNNLHGELPETIAQLTSLEIFSVFTNNFTGSIPREFGKSNPDLTNVYLAYNRFSGELPPDLCSDGMLTILAGQNNSFSGPLPKSLRNCSSLFRVRLDDNHFSGNITDAFGVLPNLIFISLAGNQLVGELSPEWGECFNLTEMEMGSNKLSGKIPSELSKLSQLRHLSLHSNEFTGNIPPEIGNLSQLLLFNLSSNHLSGEIPKSYGRLGQLNSLDLSNNNFSGSIPRELGDCSHLLSLNLSHNNLSGVIPYELGNLVTLQIMLDLSNNSLSGAIPSNLGKLASLEILNVSHNHLSWTIPRSFSSMLSLQSIDFSYNNLSGSIPTGRVFQTATAEAYVGNSGLCGDVKGLTCPKLFSLDKSGGVNKKVLLGVIIPVCVLFIGMIGVGVLLCRWHAKKRLDEEPVMRAVAQQLALATTHACVTEPFGMITISKLTGFNSRTVA 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0139 754 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 426 573 - -
Aed4g0139 754 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 161 - -
Aed4g0139 754 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 144 491 - -
Aed4g0139 754 PANTHER OS01G0515300 PROTEIN 426 573 - -
Aed4g0139 754 PANTHER OS01G0515300 PROTEIN 144 491 - -
Aed4g0139 754 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 481 706 - -
Aed4g0139 754 Pfam Leucine Rich Repeat 596 617 IPR001611 GO:0005515
Aed4g0139 754 Gene3D Ribonuclease Inhibitor 321 666 IPR032675 -
Aed4g0139 754 Gene3D Ribonuclease Inhibitor 40 320 IPR032675 -
Aed4g0139 754 PRINTS Leucine-rich repeat signature 594 607 - -
Aed4g0139 754 PRINTS Leucine-rich repeat signature 548 561 - -
Aed4g0139 754 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Aed4g0139 754 SUPERFAMILY L domain-like 379 644 - -
Aed4g0139 754 SUPERFAMILY L domain-like 31 241 - -
Aed4g0139 754 PANTHER OS01G0515300 PROTEIN 10 161 - -
Aed4g0139 754 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Aed4g0139 754 SUPERFAMILY L domain-like 243 449 - -
Aed4g0139 754 SMART LRR_typ_2 100 124 IPR003591 -
Aed4g0139 754 SMART LRR_typ_2 425 449 IPR003591 -
Aed4g0139 754 SMART LRR_typ_2 594 617 IPR003591 -
Aed4g0139 754 SMART LRR_typ_2 618 643 IPR003591 -
Aed4g0139 754 SMART LRR_typ_2 304 328 IPR003591 -
Aed4g0139 754 SMART LRR_typ_2 473 497 IPR003591 -
Aed4g0139 754 SMART LRR_typ_2 148 172 IPR003591 -
Aed4g0139 754 SMART LRR_typ_2 521 545 IPR003591 -
Aed4g0139 754 PANTHER OS01G0515300 PROTEIN 481 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0139 Aed-Chr4 1014647 1018170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0139 26 726 Receptor kinase-like Gene Family AT4G08850 39.499 4.25e-144 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0139 - - gmx:100809137 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0139 4 1014647 1018170 Aed4g0139 4 1014647 1018170 ECH