Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0120 ATGGAGGGTGGTGGGGCTAGTAGTTTCAGGATTGGAAGTTCATCCATTTGGAGAAATAGTGACGCTGAGATCTTCTCAAACTCTTTCCAGCAACAAGAAGATGATGAAGAGGCTCTCAAATGGGCTGCAATTCAGAAACTTCCCACTGTTGCGCGTTTGAGGAAAGCTCTGATCACTTCGCCTGATGGGAAAGCCAGTGAGATTGATGTACAGAAACTTGGGTCGCAAGAAAAGAGAGCTTTACTTGAAAGACTCGTGAAAACTGCTGAAGAGGACAATGAGAAGTTTTTGCTCAAACTCAAGGACAGGGGCCTGTTGAATTCTCTTCATGTACTTCCAAGTAGAAAACAACATTTAAACATTCTAGAGGATGTTAGCGGAATAATAAAACCTAGAAGAATGACATTGCTTTTAGGCCCTCCAAGTTCTGGGAAAACCACACTCCTGCTGGCCTTGGCAGGAAAACTTGATCCAAAATTAAAGTTCTCTGGAAAGGTGACTTATAATGGTCACAGGATGAATGAGTTTGTACCCCAAAGGACTGGAGCTTATGTCAATCAAAATGATCTTCATGTTGCAGAATTGACAGTAAGAGAAACTTTGGCCTTCTCAGCAAGAGTCCAAGGAGTTGGACCGCGTTATGACTTGATGCTAGAATTGTCTAGAAGAGAAAAAGAGGCGCACATCAAGCCTGATCCAGATATTGATGCCTACATGAAGGCTGTAGCATCTGAAGGGCAAAAGGCAAATATGATAACAGATTATGTCCTAAGGATTCTAGGACTAGAAGTTTGTGCAGATACTGTTGTAGGAAATGCAATGTTAAGAGGCATCTCTGGTGGACAAAGAAAACGTGTTACAACAGGGGAAATGCTGGTTGGACCAGCTAAAGCTCTTTTTATGGATCAAATATCCACTGGTTTGGATAGCTCAACAACTTTCCAAATTGTGAATTCACTGAAGCAATATGTCCAAATTCTCAAAGGAACCATAGTCATCTCACTCCTTCAGCCAGCACCAGAGACTTACAATCTTTTCGATGACATCATTCTACTCTCTGATAGTCACATTGTGTATCAAGGACCCCGTGAACATGTGCTTGAATTTTTCGAATTAATGGGTTTTAGATGTCCTGAGAGGAAAGGTGTGGCGGACTTTTTGCAAGAAGTGACATCAAGGAAAGATCAGGAGCAGTATTGGGCACAGAAAGATCAACCTTATAGATTTGTCACAGCCAAAGAGTTCTCAGAGACACTTAAGTCATTTCATGTTGGGAGAAGCCTTGGTGAAGAACTTACTACTGAATTTGACAAGTCTAAGAGCCACCCAGCCGCATTGACAACAAAAAAGTATGGAGTGGGACAATGGGAACTGTTAAAAGCTTGCTTATCGAGAGAATATTTACTTATGAAGCGCAATTCATTCGTCTACACCTTCAAGTTTTCCCAAATTGCTGTAATGGCAATTATTGCCATGACCATTTTCCTCCGGACTGAGATGCACAGAGATTCAGTGACTGATGGAGGCATATATGCGGGTGCATTGTTCTTTGGTGTTGTTGTGATTATGTTCAATGGAATGGCTGAAATTTCCATGGTAGTTTCAAGACTTCCTGTTTTCTACAAGCAAAGGGATTATCTATTCTTCCCTTCATGGGTATATGCACTTCCTGCATGGATCCTAAAAACCCCCTTGGCTTTTGTGGAAGTGGGTGTTTGGGTATTCCTCACCTACTATGTCATTGGTTTTGATCCATATGTTGGAAGAATGTTTAGGCAATACCTTGTTCTGTTTCTGGTAAATCAAATGGCTTCAGCATTGTTCCGATTCATTGCAGCAGTTGGCAGGGAAATGATAGTGGCTCTAACACTTGGATCGTTTACAATGGCCATCCTATTTGCTATGAGTGGTTTTGTCCTATCAAAAGACAATATAAAAAAATGGTGGCTGTGGGGCTTCTGGATATCACCGATGATGTATGGACAGAATGCTATGGTAAATAATGAGTTCCATGGGGAGAGTTGGAGACATTTTCTACCTAACTCAACGGAGCCACTAGGAGTTGAAATTTTGAAATCGCGTGGATTCTTCACTCAGTCATACTGGTACTGGATTGGTGTTGTGGCTTTGGTAGGATATACATTACTTTTCAACTTTGGCTACATGCTTGCTCTCGCATACTTAAATCCACTTGGGAAACATCAGGCTGTTATATCAGAGGAACCTCAAAGCAATGAGCAGAATGATGGTAGTCAAAAGGGAACTAATGTGTTGAAGACTTTAAAACATAGCTTTTCTCAGCACTCAAATACAGTGAGAAATGGCGGAAGTATTAGTGAAAGCACCTCTCCCAACACAAATCATAACATGACAAGAGGAATGGTTCTTCCTTTTGAACCTCATTCCATCACCTTTGAGGATGTCACATATTCTGTTGACATGCCAGTGGAAATGAGGAAAGGAGGTGTTGTTGAAGATAAATTGGTTCTTTTGAAGGGTGTTAGTGGAGCTTTCAGGCCAGGTGTTCTCACTGCTCTAATGGGTGTCACTGGTGCTGGCAAAACAACTATGATGGATTATGATCATGGGTTTTGTTACCAAGTATTGTCTAAAATTGATAATTGA 2625 0.413 MEGGGASSFRIGSSSIWRNSDAEIFSNSFQQQEDDEEALKWAAIQKLPTVARLRKALITSPDGKASEIDVQKLGSQEKRALLERLVKTAEEDNEKFLLKLKDRGLLNSLHVLPSRKQHLNILEDVSGIIKPRRMTLLLGPPSSGKTTLLLALAGKLDPKLKFSGKVTYNGHRMNEFVPQRTGAYVNQNDLHVAELTVRETLAFSARVQGVGPRYDLMLELSRREKEAHIKPDPDIDAYMKAVASEGQKANMITDYVLRILGLEVCADTVVGNAMLRGISGGQRKRVTTGEMLVGPAKALFMDQISTGLDSSTTFQIVNSLKQYVQILKGTIVISLLQPAPETYNLFDDIILLSDSHIVYQGPREHVLEFFELMGFRCPERKGVADFLQEVTSRKDQEQYWAQKDQPYRFVTAKEFSETLKSFHVGRSLGEELTTEFDKSKSHPAALTTKKYGVGQWELLKACLSREYLLMKRNSFVYTFKFSQIAVMAIIAMTIFLRTEMHRDSVTDGGIYAGALFFGVVVIMFNGMAEISMVVSRLPVFYKQRDYLFFPSWVYALPAWILKTPLAFVEVGVWVFLTYYVIGFDPYVGRMFRQYLVLFLVNQMASALFRFIAAVGREMIVALTLGSFTMAILFAMSGFVLSKDNIKKWWLWGFWISPMMYGQNAMVNNEFHGESWRHFLPNSTEPLGVEILKSRGFFTQSYWYWIGVVALVGYTLLFNFGYMLALAYLNPLGKHQAVISEEPQSNEQNDGSQKGTNVLKTLKHSFSQHSNTVRNGGSISESTSPNTNHNMTRGMVLPFEPHSITFEDVTYSVDMPVEMRKGGVVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTMMDYDHGFCYQVLSKIDN 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0120 874 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 103 - -
Aed4g0120 874 Pfam ABC-2 type transporter 458 670 IPR013525 GO:0016020|GO:0140359
Aed4g0120 874 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 103 - -
Aed4g0120 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 379 IPR027417 -
Aed4g0120 874 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 104 860 - -
Aed4g0120 874 SMART AAA_5 131 356 IPR003593 -
Aed4g0120 874 Pfam ABC-2 type transporter 337 424 IPR043926 GO:0140359
Aed4g0120 874 Gene3D - 777 864 IPR027417 -
Aed4g0120 874 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 379 IPR003439 GO:0005524
Aed4g0120 874 Pfam ABC transporter 122 303 IPR003439 GO:0005524
Aed4g0120 874 Pfam Plant PDR ABC transporter associated 675 738 IPR013581 -
Aed4g0120 874 CDD ABCG_PDR_domain1 113 361 IPR034001 -
Aed4g0120 874 Gene3D - 108 421 IPR027417 -
Aed4g0120 874 PANTHER ATP-BINDING CASSETTE TRANSPORTER 104 860 - -
Aed4g0120 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 800 859 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0120 Aed-Chr4 866089 873603 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0120 K08711 - gmx:732607 1519.6