Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0119 ATGGAGGGTGGGAGTAGTTTCAGGATTGGTAGTTCATCATCCATTTGGAGGGTCGACAGTGACGTGGCAGAGATCTTCGCGAACTCTTTCTGCCAAGAGAATGATGAAGAGGCTCTCAAATGGGCTGCCATTCAGAAACTTCCCACCATTGCACGGTTGAGGAAAGCTTTGCTCACTTCATCAGAAGGGAAGGTCAACGAGATTGATGTGAAGAAACTTGGGTTGCAAGAAAGGAAAGATTTACTTGAAAGACTGGTCAGAACTGTTGAAGAGGACCATGAGAAGTTTTTGCTCAAGCTCAGGAACCGAATTGATAGAGTTGGAATTGATCTTCCTACTGTAGAGGTTCGGTTTAAGAACTTGAACGTGGAAGCAGAAGTTCATGTAGGAACTAGAGCATTGCTTACCTTCACTAACTTCATGGTTAATATAGTTGAGGGCCTGTTGAACTTTCTTCACATACTTCCAAGTAGAAAACAACATATAAATATTCTCCGGGATGTTAATGGAATAATAAAGTCTGCCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCTGGAAAAACAACCCTCTTGTTGGCGTTGGCAGCAAAACTTGATCCAAAATTAAAATTGTCTGGAAAGGTGACATATAATGGTCATGAGATGAATGAGTTTGTACCCCAACGAACTGCTGCATATGTCAATCAAAATGATCATCATGTTGCAGAATTGACAGTCAGAGAAACCTTGGCCTTCTCAGCAAGAGTCCAAGGAGTTGGAACTCATTATGATTTGCTCGCAGAATTGTCCAAAAGAGAAAAAGAGGCAAATATCAAGCCTGATCCAGTTATTGATGCCTACATGAAGGCTGTAGCAACAGAAGGCCAGAAGGAAAATTTGATAACAGATTATGTCCTAAGGATTTTGGGACTGGAGGTCTGTGCTGATACTATTATAGGAAATGCAATGTTAAGAGGAATCTCCGGTGGACAAAAGAAACGCCTTACCACAGGAGAGATGCTGGTTGGACCAGCTAAAGCTCTATTCATGGATGAAATATCAACTGGTTTGGATAGCTCAACAACATTTAAAGTTTTGAAATCAATTAAGCAATGTGTTCACATTCTCAAAGGAACTGCAGTCATCTCACTCCTGCAGCCAGCACCAGAGACTTATAATCTATTTGATGATATTATTCTACTCTCTGATACTCACATTGTGTACCAGGGTCCTCGTGAATACGTGCTTGAATTTTTTGAATCAATGGGTTTTCAATGTCCAGAGAGGAAAGGTGTGGCTGATTTTTTGCAAGAAGTAACATCAAGGAAGGATCAAGAGCAGTTCTGGGCAAACAAAGATAAGCCTTATAGATTTGTAACAGCAAAAGAGTTCTCAGAGGCATATAAGTCATTTCATGTTGGGAGAAGCCTTGCTGAAGAACTTGCTACTGAATTTGACAAGTCTAAGAGCCACCCAGCTGCTTTGACAACCAAAAACTATGGGGTAGGAAAATGGGAGCTGTTAAAAGCTTGTTTCTCAAGAGAATATTTACTTATGAAGCGCAATTCATTTTTTTACACCTTCATGCTCAGCCAGGTAGGTTTGGAAATTGGAAAATATTTGACTTTCATTGTCGTTTCATCTAATCCTATTATTTTCATACTGATAGCTTCCCCTTCCTTTCAGCAAGTGGCAACGGCTTTTATTGCCATGACCGTTTTCCTCCGGACTGAGATGCACAGAGATTCAGTGGCTGATGGGGGAATATATATGGGTGCATTGTTCTTTGGCCTTGTTGGGATTACGTTTAGTGGAATGGCTGAAACTTCCATAGTTGTTTCAAGGCTTCCTGTTTTCTACAAGGAAAGGGATAATCTGTTTTTTCCTTCATGGGCATATGCTCTTTCTGAATGGATCCTAAAATTCCCCATGAATTTTGTGGAAGTGTCCGTTTGGGTATTTCTCACCTACTATGCCATTGGTTTTGATCCATATATTGGAAGATTTTGTAAGCAATATCTTGTTCTTGTACTAGTAAAGCAGATGGCTTCAGCATTATACAGATTTGTTGCTGCACTTGGGAGGGAATCGACAGTAGCTCTAACACTTGGGTCGGTTACAAATGCCACCCTTTTGGCTATGAGTGGTTTTGTCCTATCAAAAGACAATACAAAAAAATGGTGGCTATGGGGTTTCTGGATATCACCTATGATGTATGGACAGAATGCCTTGGTAAATAATGAGTTCCTTGGAAAGACATGGAGACATATTTTACCTAACTCAACGGAGCCGCTAGGTGTAGAAGTTTTGAAATCCAGGGGGTTCTTCACTCAGTCATACTGGTATTGGATAAGTGTTGGGGCATTGATTGGCTATACATTACTTTTCAACTTTGGCTACATCCTTGCTCTCATGTACTTGAGTCCACACGGAAAGCACCAGGCTGTTATATCAGAGGAACATCAAAGCAATGAGAAGAATGGTGGTAGTAAAAAAGGAACTAATGTGCTGAGGCATTTGAAATATAGCTTATCTCAGCACTCCAATAGAGTGAGAAAAGGCAAAAGGGTAAGTGGAAGCACATATTCTCAAACTTTACCCGCTAGAGGAATGGTTCTTCCTTTTCAGCCACATTCTATCACCTTTGATGAAGTAACATATGCTGTGGACATGCCACAGGAAATGAGGGACCAAGCTGTTGTTGAGGATAAATTGGTTCTTTTGAAGGGTGTCAGTGGAGCTTTTAGGCCAGGTGTTCTCACTGCTCTAATGGGAGTCACTGGTGCAGGCAAAACAACACTGTTGGATGTACTTGCTGGTAGAAAAACTGGAGGATATGTTGGAGGGAACATCACAATCTCTGGTTATAGGAAAAAGCAAGAAACATTTACAAGGATTTCTGGATACTGTGAGCAAAATGACATCCACTCTCCACATGTTACCGTGTATGAATCCTTGCTCTATTCAGCTTGGCTCCGATTGTCCCCAGACATCAATGCTGAAACTAGAAGAGTTAGTATCTAA 3006 0.4105 MEGGSSFRIGSSSSIWRVDSDVAEIFANSFCQENDEEALKWAAIQKLPTIARLRKALLTSSEGKVNEIDVKKLGLQERKDLLERLVRTVEEDHEKFLLKLRNRIDRVGIDLPTVEVRFKNLNVEAEVHVGTRALLTFTNFMVNIVEGLLNFLHILPSRKQHINILRDVNGIIKSARMTLLLGPPSSGKTTLLLALAAKLDPKLKLSGKVTYNGHEMNEFVPQRTAAYVNQNDHHVAELTVRETLAFSARVQGVGTHYDLLAELSKREKEANIKPDPVIDAYMKAVATEGQKENLITDYVLRILGLEVCADTIIGNAMLRGISGGQKKRLTTGEMLVGPAKALFMDEISTGLDSSTTFKVLKSIKQCVHILKGTAVISLLQPAPETYNLFDDIILLSDTHIVYQGPREYVLEFFESMGFQCPERKGVADFLQEVTSRKDQEQFWANKDKPYRFVTAKEFSEAYKSFHVGRSLAEELATEFDKSKSHPAALTTKNYGVGKWELLKACFSREYLLMKRNSFFYTFMLSQVGLEIGKYLTFIVVSSNPIIFILIASPSFQQVATAFIAMTVFLRTEMHRDSVADGGIYMGALFFGLVGITFSGMAETSIVVSRLPVFYKERDNLFFPSWAYALSEWILKFPMNFVEVSVWVFLTYYAIGFDPYIGRFCKQYLVLVLVKQMASALYRFVAALGRESTVALTLGSVTNATLLAMSGFVLSKDNTKKWWLWGFWISPMMYGQNALVNNEFLGKTWRHILPNSTEPLGVEVLKSRGFFTQSYWYWISVGALIGYTLLFNFGYILALMYLSPHGKHQAVISEEHQSNEKNGGSKKGTNVLRHLKYSLSQHSNRVRKGKRVSGSTYSQTLPARGMVLPFQPHSITFDEVTYAVDMPQEMRDQAVVEDKLVLLKGVSGAFRPGVLTALMGVTGAGKTTLLDVLAGRKTGGYVGGNITISGYRKKQETFTRISGYCEQNDIHSPHVTVYESLLYSAWLRLSPDINAETRRVSI 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0119 1001 Gene3D - 152 464 IPR027417 -
Aed4g0119 1001 PANTHER ATP-BINDING CASSETTE TRANSPORTER 556 1000 - -
Aed4g0119 1001 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 529 - -
Aed4g0119 1001 Pfam ABC transporter 165 347 IPR003439 GO:0005524
Aed4g0119 1001 Coils Coil 72 92 - -
Aed4g0119 1001 Pfam Plant PDR ABC transporter associated 748 811 IPR013581 -
Aed4g0119 1001 Pfam ABC transporter 902 985 IPR003439 GO:0005524
Aed4g0119 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 987 IPR027417 -
Aed4g0119 1001 Gene3D - 874 1001 IPR027417 -
Aed4g0119 1001 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 422 IPR003439 GO:0005524
Aed4g0119 1001 Pfam ABC-2 type transporter 380 476 IPR043926 GO:0140359
Aed4g0119 1001 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 556 1000 - -
Aed4g0119 1001 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 10 529 - -
Aed4g0119 1001 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 422 IPR027417 -
Aed4g0119 1001 SMART AAA_5 174 406 IPR003593 -
Aed4g0119 1001 Pfam ABC-transporter N-terminal 89 140 IPR029481 -
Aed4g0119 1001 Pfam ABC-2 type transporter 501 743 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0119 Aed-Chr4 852678 857871 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0119 K08711 - gmx:100812888 1533.08