Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0117 ATGGAAATGGAGGATGGGGATAGTGTCAAAGCAGGAACAAGTTTCAAAGTAGGCAGTAGTAGTACTATGAGTAGTTTCAGGATTGGGAGTATCAAAGCTTGGAGCAACAGTGGTGTGGAAATCTTTGCCAACTCTTTCCACCAAGAAGATGATGAAGAGGCTCTTAAATGGGCTGCCATTCAGAAACTTCCCACGGTTGCACGTTTGAGGAGAGGCTTGCTGACTTCACCTGAAGGCGTTGCCAATGAGATCGATGTTCATCAACTTGGGTTGCAAGAAAGGAGAGGCTTGCTTGAGAGGCTCGTCAGAATCGCCGAAGAGGACAATGAGAAAGTTGGAATTTCCATTCCTACAATAGAGGTTCGATTTGAGGACATGAACATTGGAGCAGAAGTTCATGTAGGTAGCAGAGCTTTGCCCACTTTCACTAACTACATGGTTAATAAACTAGAGGGACTATTGAACTTCTTTCATGTTATTCCTACTAGGAAACAACATATCAATATTCTCCAGAATGTTAGTGGAATAATAAGACCTGCCAGAATGACATTGCTTTTGGGCCCTCCAAGTTCTGGGAAGACCACACTCCTTTTGGCCTTGGCTGGGAGGCTTGATTCAAAACTAAAGTTCACTGGAAAGGTGACTTATAATGGCCATGGGATGAATGAGTTTGTACCCCAAAGAACTGCTGCTTATGTGAGTCAAAATGATCTTCATATTGGAGAAATGACTGTCAGAGAAACCTTGGCCTTCTCCGCGCGCGTCCAAGGAGTTGGACCTCGTTATGATTTGCTAACAGAGGTGTCCAGAAGAGAGAAAGAGGCAAATATTACACCTGATCCAGATATAGATGTCTATATGAAGGCTGTAGCAACTGAAGGCCAGAAAGCCAATTTTATCACAGATTATATACTAAGGATTTTGGGACTGGAGGTTTGTGCTGATACCATTGTGGGAAATGAAATGTTAAGAGGTATTTCTGGTGGACAAAGAAAACGAGTTACAACAGGGGAAATGCTGGTTGGACCAGATAAAGCTGTATTCATGGATGAAATATCTACTGGTTTGGATAGTTCAACAACTTTTCAAGTTGTGAATTCACTCAAGCACTTTATCCACTCTCTCAAAGGAACTGCTGTTGTCTCACTCCTACAACCAGCACCAGAGACTTACAATCTTTTTGATGACATTATTCTACTCTCTGATGGCCAAATTGTGTATCAAGGTCCCCGCGAACATGTTCTTGAATTTTTCGCTTCTGTGGGTTTCAAATGTCCCGAGAGGAAAGGTGTTGCAGACTTTCTGCAAGAAGTGACATCAAGGAAAGATCAAGAGCAATATTGGGTACAGAGAGACCAGCCTTATAGATTTGTCACAGCCAAAGAGTTTGAAGAGGCATTTCAATCATTTCATGTTGGTAGAAGCCTTGCTAATGAACTTGCTACTCAATTTGACAAGTCTAAAAGCCACCCTGCAGCTTTGTCAACCAAAATGTATGGATTAGGAAAATGGGAACTGTTGAAGGCTTGCTTGTCAAGAGAATATTTACTCATGAAGCGTAATTCATTTGTCCACATCTTCCAACTTTGCCAACTTGCTGTAGTGGCCTTTATTGCCATGACTGTTTTCTTCCGGACTGAGATGCACCAAAATTCAGTGACTGATGGTGGTATATATGCGGGTGCATTGTTCTATGGCCTTCTTGTAATTTTGTTGGATGGATTTTCTGACCTTGCCATGACAGTTTCCAAGCTTCCTGTTTTTTACAAGCAAAGGGACTTTCTCTTCTTCCCTTCATGGGTATATGCTCTTCCTGCATGGATCCTAAAAATCCCCATGACTCTTGCACAAGTGGGAATCTGGGTGTTCCTCACTTACTATGTTATTGGTTTTGATCCATATGTTGGAAGATTCTTCAGGCAATTCTTTCTTCTGTTATTTGTTAATCAGATGGCTTCTGCCTTATTCCGGTTCATTGGGGCGCTTGGTAGGGAACTGACGGCTGCTTTCACAATTGGCTCATTTGTATTGGCCATCCTTATTGCTATGAGTGGTTTCATCCTACAATATGAAAAAATGGTGGTTATGGGGATTTTGGTCTTCACCTATGATTCAAAGTGGTATTGGATAGGTGTTGGGGCACTGATTGGATATACGATAGTGTTCAATATTGCTTACATCCTTGCTCTCACCTACTTGAACCCAATTGTGCAGCATCAAGTGGTTAAATCAGAGAAATCTCAAAGCAATGAGCAGGATGGGGGAAGCACTTCTGCTAGGTCTTCATCCAGAAGGAAAGAAGTTGACAGAAGAAGAGGAATGGTTCTTCCCTTTGAACCACATTCCATCACCTTTGATGATGTAACATATTCTGTTGACATGCCACAGGAAATGAAGAATCAGGGAGTTCTTGAGGATAGGTTGAACCTTTTGAAGGGTGTCAGTGGCGCTTTCAGGCCAGGTGTTCTCACAGCACTAATGGGTTCCACTGGTGCTGGCAAAACAACTCTGATGGATAAAGACAAGATCATAATTTCCCAAGACCTTTGA 2550 0.4227 MEMEDGDSVKAGTSFKVGSSSTMSSFRIGSIKAWSNSGVEIFANSFHQEDDEEALKWAAIQKLPTVARLRRGLLTSPEGVANEIDVHQLGLQERRGLLERLVRIAEEDNEKVGISIPTIEVRFEDMNIGAEVHVGSRALPTFTNYMVNKLEGLLNFFHVIPTRKQHINILQNVSGIIRPARMTLLLGPPSSGKTTLLLALAGRLDSKLKFTGKVTYNGHGMNEFVPQRTAAYVSQNDLHIGEMTVRETLAFSARVQGVGPRYDLLTEVSRREKEANITPDPDIDVYMKAVATEGQKANFITDYILRILGLEVCADTIVGNEMLRGISGGQRKRVTTGEMLVGPDKAVFMDEISTGLDSSTTFQVVNSLKHFIHSLKGTAVVSLLQPAPETYNLFDDIILLSDGQIVYQGPREHVLEFFASVGFKCPERKGVADFLQEVTSRKDQEQYWVQRDQPYRFVTAKEFEEAFQSFHVGRSLANELATQFDKSKSHPAALSTKMYGLGKWELLKACLSREYLLMKRNSFVHIFQLCQLAVVAFIAMTVFFRTEMHQNSVTDGGIYAGALFYGLLVILLDGFSDLAMTVSKLPVFYKQRDFLFFPSWVYALPAWILKIPMTLAQVGIWVFLTYYVIGFDPYVGRFFRQFFLLLFVNQMASALFRFIGALGRELTAAFTIGSFVLAILIAMSGFILQYEKMVVMGILVFTYDSKWYWIGVGALIGYTIVFNIAYILALTYLNPIVQHQVVKSEKSQSNEQDGGSTSARSSSRRKEVDRRRGMVLPFEPHSITFDDVTYSVDMPQEMKNQGVLEDRLNLLKGVSGAFRPGVLTALMGSTGAGKTTLMDKDKIIISQDL 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0117 849 MobiDBLite consensus disorder prediction 744 770 - -
Aed4g0117 849 Pfam ABC-2 type transporter 506 698 IPR013525 GO:0016020|GO:0140359
Aed4g0117 849 Pfam ABC transporter 170 352 IPR003439 GO:0005524
Aed4g0117 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 426 IPR027417 -
Aed4g0117 849 PANTHER ATP-BINDING CASSETTE TRANSPORTER 25 693 - -
Aed4g0117 849 Gene3D - 155 469 IPR027417 -
Aed4g0117 849 CDD ABCG_PDR_domain1 160 409 IPR034001 -
Aed4g0117 849 SMART AAA_5 179 411 IPR003593 -
Aed4g0117 849 MobiDBLite consensus disorder prediction 744 759 - -
Aed4g0117 849 Gene3D - 743 840 IPR027417 -
Aed4g0117 849 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 700 839 - -
Aed4g0117 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 775 838 IPR027417 -
Aed4g0117 849 Pfam Plant PDR ABC transporter associated 701 742 IPR013581 -
Aed4g0117 849 PANTHER ATP-BINDING CASSETTE TRANSPORTER 700 839 - -
Aed4g0117 849 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 427 IPR003439 GO:0005524
Aed4g0117 849 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 25 693 - -
Aed4g0117 849 Pfam ABC-2 type transporter 385 478 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0117 Aed-Chr4 830645 838566 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0117 K08711 - gmx:100813417 1475.3