Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0105 ATGGCTGCAGATTCTTCAAACCTTAGAATCACCATTGAAAGAAACCCTTCCCAGTCACGCCTTGCTGAGTGGGGTTGCTCTCCAGGGAAATACCAATTGAAGTTTGATGCAGAAGAGATATGCTATTTGTTGAAAGGGAAGGTGAAGGCATATCCAAAAGGGTCATCAGAATTTGTTGAGTTTGGTGCTGGGGATCTTGTCACTATTCCAAAAGGACTCAGTTGCACTTGGGATGTGTCTGTTGCAGTGGATAAGTACTACAAGTTTGAATCAACTTCTTCTTCATCTTCATCATCTTATTAA 303 0.4158 MAADSSNLRITIERNPSQSRLAEWGCSPGKYQLKFDAEEICYLLKGKVKAYPKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTSSSSSSSY 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0105 100 Gene3D Jelly Rolls 1 89 IPR014710 -
Aed4g0105 100 PANTHER OS04G0445200 PROTEIN 2 96 - -
Aed4g0105 100 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 96 - -
Aed4g0105 100 SUPERFAMILY RmlC-like cupins 10 87 IPR011051 -
Aed4g0105 100 CDD cupin_TM1112-like 24 89 - -
Aed4g0105 100 Pfam EutQ-like cupin domain 19 87 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0105 Aed-Chr4 754910 755793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0105 - - gmx:100793722 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0105 4 754910 755793 Aed4g0105 4 754910 755793 ECH
Aed4g0105 4 754910 755793 Aed8g0294 8 2463545 2464371 PCT