Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0104 ATGACAGGGCTTCCTCGCCATCGCGATCACGCTTCTTCTTCTTCATCCTCCTCCTCTCACAATTCCAACAGCAGTGGTAGCAATGTATTTAATTTGCTTGCAAGGAGGGAGATCTCACCCCGATCAAAATACGTGGCAAAATGGCATTGGGTAGAAGCTTCAAAATCAAAGTCCAGTCCTTATTCTCGTCCTAAAAATGAAGTTGTGAGAGATGCAAGACGTGGTCTCCTCTCATGGGTTGAGGCTGAGTCATTGCGGCATTTGTCTGCTAAGTATTGTCCTTTGTTGCCTCCTCCAAGGTCTACTATTGCAGCAGCATTTAGTCCAGATGGGAAAGTTCTTGCCTCCACACACGGTGACCACACAGTAAAGATAATTGATTGTGAAACTGGAAGTTGCTTAAAGGTGCTAGTTGGCCATAGGAGAACGCCTTGGGTGGTTAGGTTCCATCCACTGCATCCACATATACTTGCTAGTGGGAGCTTAGATCAAGAAGTTCGTTTATGGGATGCTAACACATCAGAGTGCATAATATCTCATCATTTCTATCGCCCCATTGCATCTATTGCTTTTCATGCCAAAGGTGAAATAATTGCTGTTGCATCTGGCCACAAGTTGTACATATGGCACCACAACAAGAAAGGCGAAGCATCCTCACCAATATTTGTGTTGAAGACAAAGCGCTCCCTTCGTGCTGTGCATTTTCACCCTCACGCCGCACCATATCTTTTAACTGCAGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACGGAGGCAACATCTCTTGGTTATTTACAATATCCTCCTCCTGCTGTTTTTGTCACAAATATTCATCCTACAGAACATATTAGTTTGTCCAGTGAACTACCTTATGTGTCATTACCTTTCTACATTATGCCCGCATATAATGTTGATGAGTCAAGAGCAGAACTACAGCATGCTAGTCATGATGTTGGCTCAGGTAGCATGCAAATTGAGTCTTCTGCCATGGTACAGTTACAAGCAGACACAAGTGCAGCAGAGCATTATGAGACTACAGTGTCTCCCATGGATACATTCTCTGAGATACCTTCTAGCTCTCAAACTGGTGCAGAATATCCTGCTCACACTGCTTTCTCTAATGGAATGGGAATTGGCCTCAGTAATCTCACAATGGATGGTATGGAGACTGATGAAACCAGACCTGCTGAAGGAAGCCAACATGGGAACTCGACTAATACCCATTCTCTTAATGGCATGCGACACGGAATGTCTAGGCAAACTGCAAACCGTGGGCTTCCCTCAGAGTTTGGTCAATTTCATCAGTTTTTTCCTTCAAATTCAAGAGACAGTGGATGGGAGATTCCCTTTCTTCAAGGATGGATAATGGGTCAAAGCCAAGTTGGTGTTCCTTCAATGCTTCCTCACATGGGTGCTAGTCGTGACAATCTATCCCAACAAATTGGTTCTTCTTCCATAATGCCGTCTAATCTTTCCACTTCTAATGTTGATGCAGCAATGCCATCTTCAGCAATACCTGGCAGCATCAGCATACCGGGTTCTTCAATGAGATCAGGTTTACGGAATCATTTTTCACAATCCCGTGTACCTGTATCTGAATCTGGCAATCTTGCTGCTTCTATTAATACCCCACATGATGGATCCGATATCCAAGCCATCGTAAGTCGAATTCAGTCAGAACTTGCCACATCAGTGGCTGCTTCAGCTGCAGAGTTGCCTTGCACTGTGAAGTTAAGAGTATGGTCACATGACATAAAAAATCCATGTGCCCCACTTAATGCTGACAGATGTCGTCTAATCATACCACATGCTGTCCTCTGCAGCGAAATGGGTGCTCATTTTTCACCATGCGGTAGATTTTTAGCTGCCTGTGTTGCATGTATGCTTCCTCATATAGAAGCTGATCCAGGATTACAAACTCCAGTACACCAAGATCCTGGTGTTGCAACATCACCAACCCGGCATCCAATTTCAGCACACCAAGTTATGTATGAGCTGCGGATATATTCCCTCGAGGAGGCAACATTTGGTTTGGTGCTTACTTCACGAGCAATTAGAGCAGCTCATTGTCTGACTTCAATTCAGTTCTCACCTACATCTGAGCACATACTACTTGCATATGGTCGGCGCCATGGCTCTCTTCTTAAAAGTATTGTCATTGATGGAGAAACAACATTGCCTATATATACAGTGTTAGAGGTATACAGAGTGTCAGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAAGACGAAGTCAATGTGGCATGCTTTCACCCTTTTGCTGGGGGAGGTCTAGTTTATGGAACAAAGGAAGGAAAGCTTAGGGTCCTCCAGTATGACGGTGCTCATGCAGTGAATGGCACTGGACCAAGTTACTTTCCTGAGGAGACCATCATTGGAGTCAGTCAGTGA 2421 0.4449 MTGLPRHRDHASSSSSSSSHNSNSSGSNVFNLLARREISPRSKYVAKWHWVEASKSKSSPYSRPKNEVVRDARRGLLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPHILASGSLDQEVRLWDANTSECIISHHFYRPIASIAFHAKGEIIAVASGHKLYIWHHNKKGEASSPIFVLKTKRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSLGYLQYPPPAVFVTNIHPTEHISLSSELPYVSLPFYIMPAYNVDESRAELQHASHDVGSGSMQIESSAMVQLQADTSAAEHYETTVSPMDTFSEIPSSSQTGAEYPAHTAFSNGMGIGLSNLTMDGMETDETRPAEGSQHGNSTNTHSLNGMRHGMSRQTANRGLPSEFGQFHQFFPSNSRDSGWEIPFLQGWIMGQSQVGVPSMLPHMGASRDNLSQQIGSSSIMPSNLSTSNVDAAMPSSAIPGSISIPGSSMRSGLRNHFSQSRVPVSESGNLAASINTPHDGSDIQAIVSRIQSELATSVAASAAELPCTVKLRVWSHDIKNPCAPLNADRCRLIIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQTPVHQDPGVATSPTRHPISAHQVMYELRIYSLEEATFGLVLTSRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLQYDGAHAVNGTGPSYFPEETIIGVSQ 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0104 806 ProSitePatterns Trp-Asp (WD) repeats signature. 157 171 IPR019775 -
Aed4g0104 806 MobiDBLite consensus disorder prediction 7 27 - -
Aed4g0104 806 SMART WD40_4 89 127 IPR001680 GO:0005515
Aed4g0104 806 SMART WD40_4 130 170 IPR001680 GO:0005515
Aed4g0104 806 SMART WD40_4 741 781 IPR001680 GO:0005515
Aed4g0104 806 SMART WD40_4 173 210 IPR001680 GO:0005515
Aed4g0104 806 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 137 175 - -
Aed4g0104 806 ProSiteProfiles Trp-Asp (WD) repeats profile. 137 179 IPR001680 GO:0005515
Aed4g0104 806 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 1 805 - -
Aed4g0104 806 MobiDBLite consensus disorder prediction 387 427 - -
Aed4g0104 806 Pfam WD domain, G-beta repeat 104 127 IPR001680 GO:0005515
Aed4g0104 806 Pfam WD domain, G-beta repeat 131 170 IPR001680 GO:0005515
Aed4g0104 806 MobiDBLite consensus disorder prediction 1 27 - -
Aed4g0104 806 Gene3D - 86 259 IPR015943 GO:0005515
Aed4g0104 806 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 1 805 - -
Aed4g0104 806 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 98 783 IPR011047 -
Aed4g0104 806 MobiDBLite consensus disorder prediction 399 427 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0104 107 210 Miscellaneous Gene Families AT5G08390 29.907 1.86e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0104 - K17985 gmx:100817857 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0104 4 744979 752777 Aed4g0104 4 744979 752777 ECH