Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0103 ATGACCGCCGCCGGCTGCTCTCTCTCTCCTGACGATGCTCTTCGCCGGTGGTGTCGCGTGCGCCAAGAGAGAATGCCGGTGTCGGTCGTCTTCCTCCTTGCTCTTCTCACCTTGCTTTTCTCTTGCCAAGTGAAGTCGATTTCTCTGAGTGTGTCGTTTGCATCATCAGAACGAGCTAAAATGTTGCTTGTTAAACCTTCTTCTGGACCATCTTCTGCACCTGTGCCATCTCCTTCTTATCAGGGTCCTCACATGACCCCAAGGCTAAAACATCATTATCATCACCGTCACCACCACAGCATGAGACCTTATGTAGTGGCTCCACCCCCTTCAAAAGACCAAGTAATGACTGAGTTAGAGAATGAAATTGCATTAGGCACATATTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGATAGTCAAAACCAGGGAAGAACTGTTGTTGATATTAACTTGGTTCCATTGGGAGAGAAATTTGACAATACAACTGCAGCTCTTACATGTGAGAGGTTTTGGCACAAGAAAGTTCCTCTAAATAGGAGCCTTTTTGGTGATTATGCTGTTGTGTACATCACTTATCCAGGAATGCCATCATCGCCGCCATATGGATCTTCAACTGGGAGTGGTCCTAGTCAAAGTGTTGATGGTAGTCTGCCAGTCAGTGCCAACTTTGTCAACAAGAACCAGAAAATGAATCTCAGGACCATAATCATCATTGCTTTATCTTCCTTTGTACTCCTGCTGGTTTTGGTGGGAGCATTTTCAATTATTTTGAAATGGAGGAAGACTAGGAGGCCATCAAGTGCTGTTGGCCCTGCATTCACATCATCTCTAAACAAGAGATCAGGACCAATTCTATTAATGAGATGTCCTCTGCCTTTGGTGCTGGTGGATCCATCTCTGGCTGGAAGTTACAACTTTGATGACATGGCAAAGGTTGCTGCTATTGCTTCAATGTGCGTTCACTCGGAGGTTACACAGAGGCCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTAATATACAATGATACAGATGAGACTTGTGGGGATTATTGTAGTCAGAAGGATTCCTCTGCTCAGGAATCTGATTTCAGAGGTGACCTTGCCCCTTCTGATAGCAGTTGGTGGAATGCGGGAGGGCTAACCCCTCGATTAACTTATGGGCAAGCATCTTCATTCATCACCATGGAATACAGTTCTGGTCCACTTGAAGACATGGAGAACAGACCGTTTTCAACTTCAAGCTTGATTGGAGATGAAGTATCTTTACCAATTAGGCATGGGAATAGATCAGGTCCCTTAAGAACAGTCCGAAACAAGCTGTCCTTACATAGATTTACGGGAAGTCGGAGTGAGCATGGAGGACCTTCTTCCAAGCGTAATTGGAATGATGGTTACTGGGTGGGGTGTGGGGCGGTGGGGGTGGATTTCTTAGCTACCGTTGCGACTTATCCCAAGCCAGATGACAAGATCAGAAGCACTTCCTTCAAAGTTCAAGGAGGCGGCAATACAGGTAATGCCTTAACCTGTGTCGCTCGCTTAGGCCTCAAACCAAGAATCATCTCCAAGGTTGCAGATGACACTCAAGGCAGGGATATATTGCATGACCTGGAGGTTGATGGGGTCTCTCCGGAAGGCACTTCACCATTTACCTATATCATTGTGGACAGTCAAACTAAGTCCCGTACTTGTATACATACCCCGGGATTTCCTCCGATGAAGCCAAATGATCTTCCTGAGTCAAGTTTGCTAACTGCATTGAATGGAGCAAGAATTGTTTATTTTGATGGGCGATTGCATGAAACTGCTCTAGTTGTTGCACATGAGGAGCTTGAGAATGAGAAAAGAGAGCATCATCTGATGGGAATTAAACAAATCTCATATTTTCCAGTACAGGCAGTTAAGAGGAATATACCTATCTTAATGGATGCAGAAAGGCTGAGAGAAGGGTTGGATGATCTCGTGAAATTAGCTGCTTATGTCGTGTGCCCTGCACAGTTTCCACAGGCATGGACAGAGGCATCAACAGTTCCTAAAGCTCTTACAGTGGCAAAATTGCATGCAGAAGGTATAGGAACAGTTTGTGGCAGGTTATACATTGGAACAGCTGAGAGCATACCACCATCAGAGCTTATTGATACAACTGGTGCTGGAGATGCATTTGTTGGAGCCGTTCTCTATGCTATCTGTGCCAGCTTCGCGCCAGAGAAAATGCTGTGCTTTGCTGCTACTGTGGCAGCTTCCAAGTGCAGAGCTTCGGGAGCAAGAAGTGGTCTCCCTTACCGCACAGATCCATGCCTGGCATCCTTCATGCACTAG 2331 0.4599 MTAAGCSLSPDDALRRWCRVRQERMPVSVVFLLALLTLLFSCQVKSISLSVSFASSERAKMLLVKPSSGPSSAPVPSPSYQGPHMTPRLKHHYHHRHHHSMRPYVVAPPPSKDQVMTELENEIALGTYLEQSQVKIMGATADSQNQGRTVVDINLVPLGEKFDNTTAALTCERFWHKKVPLNRSLFGDYAVVYITYPGMPSSPPYGSSTGSGPSQSVDGSLPVSANFVNKNQKMNLRTIIIIALSSFVLLLVLVGAFSIILKWRKTRRPSSAVGPAFTSSLNKRSGPILLMRCPLPLVLVDPSLAGSYNFDDMAKVAAIASMCVHSEVTQRPFMGEVVQALKLIYNDTDETCGDYCSQKDSSAQESDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEDMENRPFSTSSLIGDEVSLPIRHGNRSGPLRTVRNKLSLHRFTGSRSEHGGPSSKRNWNDGYWVGCGAVGVDFLATVATYPKPDDKIRSTSFKVQGGGNTGNALTCVARLGLKPRIISKVADDTQGRDILHDLEVDGVSPEGTSPFTYIIVDSQTKSRTCIHTPGFPPMKPNDLPESSLLTALNGARIVYFDGRLHETALVVAHEELENEKREHHLMGIKQISYFPVQAVKRNIPILMDAERLREGLDDLVKLAAYVVCPAQFPQAWTEASTVPKALTVAKLHAEGIGTVCGRLYIGTAESIPPSELIDTTGAGDAFVGAVLYAICASFAPEKMLCFAATVAASKCRASGARSGLPYRTDPCLASFMH 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0103 776 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 115 286 - -
Aed4g0103 776 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 717 730 IPR002173 GO:0016773
Aed4g0103 776 Gene3D - 472 761 IPR029056 -
Aed4g0103 776 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 29 114 - -
Aed4g0103 776 SUPERFAMILY Ribokinase-like 472 767 IPR029056 -
Aed4g0103 776 Pfam pfkB family carbohydrate kinase 479 764 IPR011611 -
Aed4g0103 776 PANTHER OS01G0750732 PROTEIN 29 114 - -
Aed4g0103 776 PANTHER OS01G0750732 PROTEIN 298 469 - -
Aed4g0103 776 PANTHER OS01G0750732 PROTEIN 115 286 - -
Aed4g0103 776 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 298 469 - -
Aed4g0103 776 MobiDBLite consensus disorder prediction 65 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0103 Aed-Chr4 732876 743045 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0103 250 461 Receptor kinase-like Gene Family AT5G56890 36.530 2.49e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0103 - - gmx:100794767 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0103 4 732876 743045 Aed4g0103 4 732876 743045 ECH