Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0102 ATGGCGTGCATGTCGAAGTTGTTCGGCGTAACCAATGGCAGCGTCCACAACCTCAACTTCAACTCACCTCGTCGCTTCCGTTTCCGTTCCACCACCAAAATCAAAATGTCCTCCTCCGACGCCGACGCCGACGCGCTTCCTCCTCTTCCGGAAAATCGCACCGTCGTCGGATACGGAATGACGGCGGTGGATTTCTTGGCTACTGTGGACGGATTTCCGAATCCCGACGACAAGGTCCGAAGCACTTCGTTAAAGGTTGAAGGAGGTGGCAACGCCGGCAACGCGCTCACCTGTGCTGCTCGGCTCGGCTTGAAGCCGAGGCTCATCTCTAAGGTTGCAGATGACTCCCTCGGCTTCGTCATATTGAAGGAGTTACAAGCCGATGCCGTCGATGCCAGTCAACACTATTATTTGCGTTTCATGGAGCAAGATTACTTTATTTCGATGGAATGTTTCCTGAAACTGCTCTACTTGTTGCACAAGAGGGAAGGGTTGGATGAGCTCTTGAAGCTAGCCGATTTTGTTACATGCTCTGCAAAGTTTCCGCAGGCTTGGACGCAAGCACCATCTATCCCGAGCACAATGGTTTCCATGCTTTTAAGATTGCCAAATATCAACTTTGTGATTGTGACTTTGGGTGAAGATGGTTGTCTAATGTTAGAAAGAAGTGTAAATGAGGATGCTGATATAGAAGAAAGGGATGTAGAGAGTTGCTTAGAATTCTTATCTAAAGGGAAAGATGATAGTTTGGCTATCCCTACCTGTATACCATCGGCGGTGACGAAATTCAGAGCAAATGGAATAGGGACAATTTGTGGGAGATTCTATATTGGAACAGCAGAGAAGATACCAGATTCTGAGCTGATTGATACAACTGGTGCTGGGGATGCTTTTATTGGAGCCATTATGTATGCTATCTGTGCAAACATGGTACCAGAGAAAATGTTGCCACTTGCTGCTCAAGTGGCAGCTGCCAAGTGTAGAGCTTTGGGAGCTCGAACTGGTCTTCCACGTCGGACAGATCCATGCTTGGCATCCTTTTTACACTAA 1050 0.479 MACMSKLFGVTNGSVHNLNFNSPRRFRFRSTTKIKMSSSDADADALPPLPENRTVVGYGMTAVDFLATVDGFPNPDDKVRSTSLKVEGGGNAGNALTCAARLGLKPRLISKVADDSLGFVILKELQADAVDASQHYYLRFMEQDYFISMECFLKLLYLLHKREGLDELLKLADFVTCSAKFPQAWTQAPSIPSTMVSMLLRLPNINFVIVTLGEDGCLMLERSVNEDADIEERDVESCLEFLSKGKDDSLAIPTCIPSAVTKFRANGIGTICGRFYIGTAEKIPDSELIDTTGAGDAFIGAIMYAICANMVPEKMLPLAAQVAAAKCRALGARTGLPRRTDPCLASFLH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0102 349 SUPERFAMILY Ribokinase-like 54 339 IPR029056 -
Aed4g0102 349 Gene3D - 143 343 IPR029056 -
Aed4g0102 349 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 33 133 - -
Aed4g0102 349 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 290 303 IPR002173 GO:0016773
Aed4g0102 349 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 33 133 - -
Aed4g0102 349 Pfam pfkB family carbohydrate kinase 281 337 IPR011611 -
Aed4g0102 349 Pfam pfkB family carbohydrate kinase 54 135 IPR011611 -
Aed4g0102 349 Gene3D - 51 142 IPR029056 -
Aed4g0102 349 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 161 349 - -
Aed4g0102 349 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 161 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0102 Aed-Chr4 729296 732389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0102 - - gmx:100792838 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0102 4 729296 732389 Aed4g0102 4 729296 732389 ECH
Aed4g0102 4 729296 732389 Aed8g0295 8 2472649 2480595 PCT