Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0100 ATGGAGAACTTGTTTCGCCTAGTAGACCACGAGGAGTTCTTCTCTCGTCGTTGCATTTGGGTGAATGGCCCTATAATCGTAGGGGCAGGACCCGCAGGGCTAGCCACAGCGGCATGCCTTAGAGAACAAGGGGTACCCTTCATGGTTCTTGAGCGTGCAGAGTGCATAGCCTCGCTGTGGCAAAAACGAACCTACGACAGACTCAAACTTCATCTCCCGAAGCAATTTTGCCAGCTTCCGAAACTACCCTTCCCCGAGGACTTCCCGGAGTACCCCACGAAGAAACAGTTCATAGAGTATTTAGAGTCCTACGCTAAGCGCTTCGAGATCAACCCTCAGTTCAACGAGTGCGTTCAGTCCGCGAGGTACGACGAGACCAGCGGCTTGTGGCGTGTCAAGACCCTCGAGGTTGAGTACATTTGCCGCTGGCTCGTGGTGGCTACCGGCGAGAATGCCGAGTGCGTCGTGCCGGAGATTGAAGGGCTTAGTGAGTTCAAAGGTGATGTTATTCATGCTCGTGATTACAAGTCTGGGGAGACTTTTAGGGGAAAGAAGGTTCTTGTTGTTGGATGTGGGAACTCCGGCATGGAACTCTCTCTCGACCTTTGCAACCACGGCGCCTCTCCATCCATGGTCGTACGTAGCTCGGTTCACGTGTTGCCTAGAGAAGTGTTTGGAAAATCAACTTTTGAATGGGCGGTTATGATGCTGAAATGGATGCCACTTTGGCTTGTTGACAAGATTCTATTGATCTTGGCATGGTTTGTTTTGGGGAACATTGAGAAGTTGGGGCTTAAAAGGCCTTCAAAGGGACCTTTGGAGCTGAAGAACACAAAGGGGAAGACTCCAGTTTTGGATATTGGTGCCTTGGAGAAGATTAGATCCGGTGACATAGACGTGGTGCCAGGAGTCAAGAGGTTCAATAATAGAGAAGTTGAATTTGTTAATGGTGAAAAGCTTGATGTTGATGCAGTGGTGCTTGCAACCGGTTACTGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCAAAGAATGGATACCCAAAGATGCCATTCCCTCATGGTTGGAAGGGAAATGCTGGGCTTTATGCTGTGGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCTTCTGATGCTGTGAAAATTGCTCAAGATATTGGCCAAGTTTGGAAAAATGAGACTAAGCAAAAGAAACAGCGCACTACTGCTTGTCATAGACGTTGCATTTCACAGTTCTAA 1248 0.488 MENLFRLVDHEEFFSRRCIWVNGPIIVGAGPAGLATAACLREQGVPFMVLERAECIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPTKKQFIEYLESYAKRFEINPQFNECVQSARYDETSGLWRVKTLEVEYICRWLVVATGENAECVVPEIEGLSEFKGDVIHARDYKSGETFRGKKVLVVGCGNSGMELSLDLCNHGASPSMVVRSSVHVLPREVFGKSTFEWAVMMLKWMPLWLVDKILLILAWFVLGNIEKLGLKRPSKGPLELKNTKGKTPVLDIGALEKIRSGDIDVVPGVKRFNNREVEFVNGEKLDVDAVVLATGYCSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNAGLYAVGFTKRGLSGASSDAVKIAQDIGQVWKNETKQKKQRTTACHRRCISQF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0100 415 SUPERFAMILY FAD/NAD(P)-binding domain 25 291 IPR036188 -
Aed4g0100 415 SUPERFAMILY FAD/NAD(P)-binding domain 183 389 IPR036188 -
Aed4g0100 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 181 205 - -
Aed4g0100 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Aed4g0100 415 PRINTS Pyridine nucleotide disulphide reductase class-II signature 142 150 - -
Aed4g0100 415 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 10 413 - -
Aed4g0100 415 Gene3D - 24 401 IPR036188 -
Aed4g0100 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Aed4g0100 415 PRINTS FAD-dependent pyridine nucleotide reductase signature 185 203 - -
Aed4g0100 415 Pfam Flavin-binding monooxygenase-like 26 336 IPR020946 GO:0004499|GO:0050660|GO:0050661
Aed4g0100 415 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0100 Aed-Chr4 692681 694861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0100 K11816 - gmx:100819987 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0100 4 692681 694861 Aed4g0100 4 692681 694861 ECH
Aed4g0100 4 692681 694861 Aed8g0298 8 2532436 2534119 PCT
Aed8g0971 8 8471942 8476431 Aed4g0100 4 692681 694861 PCT