Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0097 ATGGAGGAAGCGCTGGAACTGTCACGTGCGAAGGACACGAAGGAGAGGATGGCGGGCGTGGAGCGGCTCCACCAACTTCTAGAAGCTTCCAGAAAGAGCCTCTCCTCTTCCGAAGTGACCTCGCTCGTCGACACGTGTATGGATCTCCTCAAGGACAACAACTTCCGCGTCTCGCAGGGCGCGCTCCAGGCCCTCGCCTCCGCCTCCGTCCTCTCCGGCGAACACTTCAAGCTCCACTTCAACGCACTCCTCCCCGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCGCGCCGCCTCTTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTTAGAGAGGAGTTTACACGAACTGTCACAGCTGCAATTAATCTATTTGCAGCTACCGAGCTTCCACTTCAACGGGCTATCCTTCCCCCTGTTTTGCATTTGCTTAATGATCCAAATCCGGCTGTTAGGGAAGCAGCTATTTTGTGCATAGAGGAGATGTATACACAAGCTGGGCCTCAATTTCGTGACGAACTTCACCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTTGAGGGAATTCAACCAAAAGTTCGCTCTTCGGATGGTATGCCAGGTGGATATATTACTGGGGAAATTAAACATGTAAGTGCTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGACATCACTGAGAAACCCATAGAACCTGTCAAGGTATATTCAGAGAAGGAGTTAATCAGGGAATTTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGTTGCTATGCAGAGAGTTGAAGGTCTTGTTCTTGGAGGTGCTATGGATTATCCATCTTTTCGTGGGCTCCTGAAGCAACTTGGTGGACCTTTAAGCACACAATTGTCAGATCGAAGATCTACAATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAGGCATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTTCTCGTGTGCTTCCTCGTATAGCCGACTGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTCTTTTGGTCCTAGAACATTGGCCTGATGCACCAGAAATACATCGATTAGCCGATTTATATGAGGATCTGATAAAGTGTTGTGTTTCAGACGCAATGAGTGAGGTACGGTCTAGTGCAAGGATGTGCTACCGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGTCGCCTATTTTTGTCCTTTGACCCTGCTATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACATCGGCGACATGCTTCACCTTCCATTCGAGATAGAGGTGCACTGACATCATTAACTAGTCAAGCCTCTGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTGGCAATGGATAGAAGTTCAAGTATATCATCAGGGACATCTATCTCATCTGGTATACTTCTTTCACAAGCTAAGTCTCTTGGTAAGGGTACAGAACGTAGTTTGGAAAGCATGTTACATGCAAGTAAACAGAAAGTTTCTGCTATTGAAAGCATGCTTAGAGGATTGGATTTGTCTGATAAGCATAATTCATCTCTCCGGTCAACAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCGGCTGTCCCTGCATCGAATCATCTGACAAGCTCTTTAACAACAGAATCAACTGTTTCTGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTTGGTTTGTCTGACATAATCACTCAGATTCAAGCTTCGAAAGATTCTGCCAAGTTATCCTATCGTAACAATGTTGGTATCGAGTCTTTATCATCATACTCAAGTAAAAGGGCCGCTGAAAGATTACAAGAAAGAAGTTCTCTTGATGATAACAGTGATGTTAGGGAGTCTCGGCGATTTATGAACACTGATAAGCAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGGGAATCACATAATAGTTATGTGCCTAATTTCCAGAGACCACTATTAAGAAAGAATGTTGCTGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAATCAGCTGTCTCTTGGAGAGGTGTCAAATTTTGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTCAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGTCCAAAGGGAACTATAGAAGTTGTTCAGAATTTTGAAAAGGTGATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCGGATATTGTTCCAGCATGCCGAAAACCTTTTGAGGGTTACATGGAAAGAATTTTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTCAGACAGCCATGTTCAACAACTTTGGAAGTTGTCAGCAAAACTTACAGTATAGATTCTCTCTTACCTGCATTATTACGCTCACTAGATGAACAAAGGTCTCCTAAGGCTAAATTGGCTGTTATTGAATTTGCAATCAATTCCTTTAACAAACATGCTATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTCGCTAAGTTAACCCCTTTGGTTCATGACAAAAACACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTGTACTCTCACTTTGATTCGACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGATGAACAAAATTCCTTGAGACGAGCATTGAAACAATACACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAGAACAAGAAAGAGAGACAACGATCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGGACATCCTCGGAAGATGGATATGTTGGTTACTCTAGGAAGGCTCATTACATTGGAAGGTATTCTGCTGGTTCCCTTGATGGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCAACACTGATGAAAGCCAGTCTTGCTCAAGCATCTTCTGGTGAAACTCAGGAACGTCTATATGATAATTTTGAGACTGATCCTAGTAGTGGTAGTCTTGGCTCAAAATCTAAGGATATTGCTTATGCAGTCAATCCAATGGGTCAAAACTTTGGCTCCCAAACTAGCTCACATGGACATGTGGAGAGTAGCATGAACTTAGAGGGTCTTTCAACTCCTTGTCTAGATGTAAATGGTTTGATGTCATCAGAGCATTTAAATGTTGCTGAAGGCTATGTAAATGACAAAGAGCATCCTTCTGCATTGGAACTTAATCATCACTCGGCTGAAGATGTAAAAATTAATTCCATGACAGACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCGAGTAAACGGACTGCACTTCAACAATTAGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCGACAGTCAAAGAGCTTGCTCTTTCGCTGATAGTTGAAATGCTTAAAAACCAGAAAGGAGCCATGGAGAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCACGTTACAAAAGATATCATTCCTAAGGTCTCGAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTTTACTGGTTACTGAGGATGAGAAAACACTCGTCATTTGCATAAATTGCTTAACAAAGCTTGTGGGTAGGCTTTCTCAGGAGGAACTGATGGCACAGTTACCCTCGTTTCTGCCTGCTCTTTTTGAAGCTTTTGGTAACCAGAGTGCAGATGTTCGTAAGACCGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGAAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATATCACAAGCCAGGACAGGCAAAGCAATTGATGCCGTTCAAGATTAG 4323 0.4319 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASASVLSGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTAAINLFAATELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGMPGGYITGEIKHVSANPKKSSPKAKSSSRENSLFGGEGDITEKPIEPVKVYSEKELIREFEKIASTLVPEKDWSIRIVAMQRVEGLVLGGAMDYPSFRGLLKQLGGPLSTQLSDRRSTIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVSRVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRLADLYEDLIKCCVSDAMSEVRSSARMCYRMFAKTWPERSRRLFLSFDPAIQRLINEEDGGIHRRHASPSIRDRGALTSLTSQASAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSLRSTSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTTESTVSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYRNNVGIESLSSYSSKRAAERLQERSSLDDNSDVRESRRFMNTDKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSLGEVSNFADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGTIEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVDEQNSLRRALKQYTPRIEVDLINYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYIGRYSAGSLDGDGGRKWSSQDSTLMKASLAQASSGETQERLYDNFETDPSSGSLGSKSKDIAYAVNPMGQNFGSQTSSHGHVESSMNLEGLSTPCLDVNGLMSSEHLNVAEGYVNDKEHPSALELNHHSAEDVKINSMTDTGPSIPQILHMICSGGDGSPISSKRTALQQLVEASITNDHSVWTKYFNQILTVVLEVLDDSDSTVKELALSLIVEMLKNQKGAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAVQD 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0097 1440 PANTHER CLASP 28 1432 - -
Aed4g0097 1440 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Aed4g0097 1440 Gene3D - 791 1015 IPR011989 -
Aed4g0097 1440 Gene3D - 1 221 IPR011989 -
Aed4g0097 1440 Gene3D - 1223 1432 IPR011989 -
Aed4g0097 1440 MobiDBLite consensus disorder prediction 608 636 - -
Aed4g0097 1440 SUPERFAMILY ARM repeat 7 402 IPR016024 -
Aed4g0097 1440 Gene3D - 267 506 IPR011989 -
Aed4g0097 1440 MobiDBLite consensus disorder prediction 219 267 - -
Aed4g0097 1440 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Aed4g0097 1440 SMART TOG_3 775 1024 IPR034085 -
Aed4g0097 1440 SMART TOG_3 1196 1432 IPR034085 -
Aed4g0097 1440 SMART TOG_3 3 224 IPR034085 -
Aed4g0097 1440 SMART TOG_3 270 514 IPR034085 -
Aed4g0097 1440 SUPERFAMILY ARM repeat 291 1430 IPR016024 -
Aed4g0097 1440 MobiDBLite consensus disorder prediction 246 261 - -
Aed4g0097 1440 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Aed4g0097 1440 PANTHER PROTEIN, PUTATIVE-RELATED 28 1432 - -
Aed4g0097 1440 Pfam CLASP N terminal 284 500 IPR024395 -
Aed4g0097 1440 Pfam CLASP N terminal 797 991 IPR024395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0097 Aed-Chr4 640737 659123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0097 K16578 - gmx:100796697 2648.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0097 4 640737 659123 Aed4g0097 4 640737 659123 ECH