Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0083 ATGGTGTCTGCAAAGGAGGCTAAACAACAAATACTAGAGGAGAATGAAAACAATGCTGGAGTAATGTTTTGCCCATTCAAGCTCTCAGAGGATGGCATTGAGATGCAATTTGCAACAAACCATCTTGGTCATTTCCACTTGACAAACCTGCTTCTTGACAAAATGAAACAAACTGCAAAAGCCACTGGAATAGAGGGCAGGATCATAAATCTGTCATCTATTGCCCATAACTACACATACAGAAAGGGGATTAGATTTAATAAGATCAATGAACGAAAAGGTTACGGTAACAAGGCAGCGTATGGACAGTCCAAGTTAGCTAACATATTGCATACAAATGAGCTTTCTCGTCGCCTGCAGGAAGAGGGTGTGAACATCACAGCCAACTCGGTCCACCCAGGAGTGATAATGACTCCTCTTATGAGACATTCTTCTTACCTTATGCACTTTCTCAAGGTCTTCACCTTTTACATATGGAAGAACGTCCCCCAGGGAGCAGCCACGACATGCTATGTTGCTCTGCACCCAAGCGTGAAAGGTGTAACTGGGAAGTACTTTGTGGATTGCAATCAATGCAAACCAAGTTCATATGGCAAAAACAAACAGCTAGCAAAGAAACTCTGGGATTTCAGTAACGATTTGATCAAATCAATTTCAAAAGCTTGA 666 0.4189 MVSAKEAKQQILEENENNAGVMFCPFKLSEDGIEMQFATNHLGHFHLTNLLLDKMKQTAKATGIEGRIINLSSIAHNYTYRKGIRFNKINERKGYGNKAAYGQSKLANILHTNELSRRLQEEGVNITANSVHPGVIMTPLMRHSSYLMHFLKVFTFYIWKNVPQGAATTCYVALHPSVKGVTGKYFVDCNQCKPSSYGKNKQLAKKLWDFSNDLIKSISKA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0083 221 Pfam short chain dehydrogenase 17 143 IPR002347 -
Aed4g0083 221 PANTHER RETINOL DEHYDROGENASE 17 217 - -
Aed4g0083 221 Gene3D - 16 218 - -
Aed4g0083 221 PRINTS Glucose/ribitol dehydrogenase family signature 101 120 IPR002347 -
Aed4g0083 221 PRINTS Glucose/ribitol dehydrogenase family signature 124 141 IPR002347 -
Aed4g0083 221 PRINTS Glucose/ribitol dehydrogenase family signature 60 76 IPR002347 -
Aed4g0083 221 PRINTS Glucose/ribitol dehydrogenase family signature 10 21 IPR002347 -
Aed4g0083 221 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 17 217 - -
Aed4g0083 221 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 194 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0083 Aed-Chr4 526525 528198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0083 K11153 - gmx:100781156 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0083 4 526525 528198 Aed4g0083 4 526525 528198 ECH