Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0075 ATGGTTGAAACCGAGATGGATACCGAAACTGTGACTGCTGAAAATGTGGTTCCACAAAAGGAGACTCCAAACACTATTCCCATCTCCCATCATCATTCCTCGTTCCCTCCTCTTAATGAGAGAATTATTTCATCAATGACTAGGGGATCTGTTGCTGCACACCCATGGCATGACCTTGAGATAGGGCCTGGTACTCCAACGATCTTCAATTGTGTCGTTGAGATTGGAAAAGGAAGCAAGGTGAAATATGAACTGGACAAAAAATCAGGGCTTATCAAGGTTATCGACCGTGTGCTTTACTCATCAGTTGTGTATCCTCACAACTATGGGTTTATCCCACGTACTCTTTGCGAGGACAGTGATCCCTTAGATGTCCTGGTTATTATGCAGGAACCGGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCAATTGGTCTTATGCCCATGATTGATCAGGGAGAGAAAGATGATAAAATAATTGCTGTTTGTGCTGATGATCCCGAGTATCGACACTACAATGACATCAAAGAGCTTCCTCCGCATCGTTTAGCTGAAATTCGTCGCTTTTTTGAAGACTACAAGAAGAATGAAAACAAGGAAGTTGCAGTAAATGACTTTTTGCCTGCCTCAGCTGCTTTTGAAGCAATTGATAGATCCATGGACTTATACGCGGACTATGTAGTGCGGAGCCTGAGGCAGTAG 702 0.4387 MVETEMDTETVTAENVVPQKETPNTIPISHHHSSFPPLNERIISSMTRGSVAAHPWHDLEIGPGTPTIFNCVVEIGKGSKVKYELDKKSGLIKVIDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAFEAIDRSMDLYADYVVRSLRQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0075 233 SUPERFAMILY Inorganic pyrophosphatase 47 228 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed4g0075 233 CDD pyrophosphatase 68 221 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed4g0075 233 Hamap Inorganic pyrophosphatase [ppa]. 67 224 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed4g0075 233 Pfam Inorganic pyrophosphatase 71 223 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed4g0075 233 Gene3D Inorganic pyrophosphatase 50 229 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed4g0075 233 ProSitePatterns Inorganic pyrophosphatase signature. 119 125 - -
Aed4g0075 233 PANTHER INORGANIC PYROPHOSPHATASE 38 227 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Aed4g0075 233 PANTHER BNAC07G03580D PROTEIN 38 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0075 Aed-Chr4 490553 494004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0075 K01507 - gmx:100500040 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0075 4 490553 494004 Aed8g0331 8 2751428 2756060 PCT