Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0073 ATGAGAACAGAATCAAAGAAGTATTCGTGGTCAAAATTAGCCATGAGGAAGTGGCTGAATATAAAGAGTAGTGCTGAGAAGTTTCACTCAGACTATGATTCAGCAACAACAGGTGAAACACGATTGATTCTTGAATTGTTGTCGATTTGCGTTTCGTTTTCACGTTTCGTGTTGAAACTTACCCGGGAGTTTTCTTTGCTGTTGCCGATGTGGGACTCAGCGACTGCGAAGGAGAGGAGAAATAGTTGTTCAGACCAAGATCGTTACGTCGTCGTACCGGATGATTTATCAGAGGGGTGGGTGATGGATTCTTCAAGCGGAATGAAACGCCCGGTAGTTGGGAAGAAATCAGTTTGTGCTGGCACTGAGGCTCTGGACCTTAGGATGTTCGTGGGGACGTGGAATGTCGGAGGGAAGTCACCAAACGAAGGCTTGAATTTGAGGAATTGGCTGACGTGTCCTTCCCCAGCTGACATCTATGTTATAGGGTTTCAAGAAATTGTACCGCTAAATGCGGGGAACGTGCTTGGGCCGGAGGATAGTGGGCCAGCAGCGAAGTGGCTGGGCCTTATCCATGAAGCCTTGAACACCATCAACAAGTGCAACCATGAAATGTCACACTATTACCACAGCGAGGAGGACAATATTGATGAACATAATCATAAAGAAAGCATAAATGAGTTCGATAATAATAAGAGTAAGAGTTCACGAAGCTATTGCTTAGCAGGAAGCAAGCAAATGGTTGGTATCTTCTTGTCCGTGTGGATACGAGCAGATCTTTGCAAGCATGTTACCAATTTGAATGTCTCCTGCGTTGGCAGAGGCATCATGGGCTATCTTGGAAACAAGGGTTCAACATCAATTAGCATGACATTGTACAACTCCACGTTCTGCTTCGTTTGCACCCACTTGGCTTCTGGGGAGAAATTTGGCGACGAGTTGCGACGGAACTTGGACGTCTCCGAAATCTTTAAGAAAACTAAATTCTGTCACTCGTTTAAATCCCTTGCTCATTCACTCCCTCCTCAAAGCATACTAGAACACGATAATATTATTTGGCTTGGCGATTTGAATTATCGCCTAGCTGCTGGCTACGATGACACACATCAACTACTGAAGATGAATAATTGGCAAGCATTACTAGAAAAGGATCAGCTAAGGATAGAGCAGAAAGCTGGTCGAGTATTCAAAGGTTGGAATGAAGGGAACATATACTTTGCTCCCACTTACAAATACTTGACCAATTCTGACAACTATGTCGCTCAATCCTCCAAATCCAAGGAAAAACGACGGACTCCTGCTTGGTGCGATCGAATATTGTGGAAAGGGGAAGGCCTGAATCAGATGTGGTATGTACGAGGAGAATCCAAATTCTCAGACCATAGGCCAGTATATTCACTATTCTCGGTTCAAGTGGACATGAAAACCAAGAATATAGCTGCCACTATGCCTAGGTGCTGTCCCTTAAAACCGTTGACAAATACTGCGTTGTCATCGACTTGTTGTGCTGCTAAAGTCCAGGCAGAAGAGCAACTTTTGCTGCTAACAAGAGCACAAAGTTGCATAGACACAGTACCCAGGTTTTGA 1587 0.4449 MRTESKKYSWSKLAMRKWLNIKSSAEKFHSDYDSATTGETRLILELLSICVSFSRFVLKLTREFSLLLPMWDSATAKERRNSCSDQDRYVVVPDDLSEGWVMDSSSGMKRPVVGKKSVCAGTEALDLRMFVGTWNVGGKSPNEGLNLRNWLTCPSPADIYVIGFQEIVPLNAGNVLGPEDSGPAAKWLGLIHEALNTINKCNHEMSHYYHSEEDNIDEHNHKESINEFDNNKSKSSRSYCLAGSKQMVGIFLSVWIRADLCKHVTNLNVSCVGRGIMGYLGNKGSTSISMTLYNSTFCFVCTHLASGEKFGDELRRNLDVSEIFKKTKFCHSFKSLAHSLPPQSILEHDNIIWLGDLNYRLAAGYDDTHQLLKMNNWQALLEKDQLRIEQKAGRVFKGWNEGNIYFAPTYKYLTNSDNYVAQSSKSKEKRRTPAWCDRILWKGEGLNQMWYVRGESKFSDHRPVYSLFSVQVDMKTKNIAATMPRCCPLKPLTNTALSSTCCAAKVQAEEQLLLLTRAQSCIDTVPRF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0073 528 Pfam Endonuclease/Exonuclease/phosphatase family 132 461 IPR005135 GO:0003824
Aed4g0073 528 SUPERFAMILY DNase I-like 123 479 IPR036691 -
Aed4g0073 528 Gene3D Endonuclease/exonuclease/phosphatase 114 488 IPR036691 -
Aed4g0073 528 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 61 517 IPR045849 GO:0004445|GO:0046855
Aed4g0073 528 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 61 517 - -
Aed4g0073 528 SMART i5p_5 125 476 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0073 Aed-Chr4 471215 474490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0073 116 472 Acyl Lipid Metabolism Gene Families AT1G65580 28.780 1.81e-38 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0073 - - gmx:100800223 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0073 4 471215 474490 Aed8g0334 8 2777980 2782317 PCT