Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0070 ATGGCCATAGCCGCCACAATCTCCATTCCTCTCACATCCCCCACTCGCCGCACTCTCGCCTCCTCCGTCAATAACCTCTCTCCCAGATCCACTCTGCCCACACCGCAACGCACTTTCAAATACCCTAATTCGCGCCTCGTCGCGTCTTCCATGAGCACCGAAACCGCCGTCGAAACCTCCTCCGCTTCCTTCCTCCAAAACGCTGAGTCCGGCGGCTTTCTCCATTTCGCCAAGTACCATGGCCTCGGAAACGACTTCGTTTTGATTGACAATAGAGACTCCTCCGAGCCCAGGATCAGTGCAGAGAAAGCGGTGCAACTGTGTGATCGGAACTTCGGCATTGGAGCTGACGGAGTTATCTTTGTACTTCCCGGCATCAATGGCACCGATTATACCATGAGGATTTTTAACTCTGATGGTAGCGAGCCTGAGATGTGTGGCAATGGAGTGCGATGCTTTGCCAAATTCGTTTCTCAACTTGAGAATTTACATGGGGGGCATAGTTTTACCATACATACTGGTGCTGGTCTGATTATTCCTGAAGTCTTGGAAGATGGAAATATCAAAGTAGATATGGGGGAGCCGATTCTTAAAGCCTCGGATGTGCCTACTAAATTGCCTGCAAATAAGGATAATGTTGTTGTTAAATCCCAGCTAGTTGTAGACGGAGTTTTCTGGCATGTGACCTGTGTTAGCATGGGAAATCCACACTGTGTAACTTTCAGCAGAGAAGGAAGCCAGAATTTGCTTGTTGATGAATTGAAGCTAGCAGAAATTGGCCCAAAATTTGAACATCATGAGTTCGTGCAAGTATTGTCTAGTTCTCACTTGAAAATGCGTGTTTGGGAGCGGGGAGCAGGAGCAACCCTAGCCTGTGGAACTGGAGCTTGTGCTACTGTTGTTGCGGCAGTTCTTGAGGGTCGTGCTGGGAGGAATTGCACGGTTGATCTACCTGGAGGGCCTCTTCAGATTGAGTGGAGGGAGGAAGATAATCATGTTTATATGACAGGCTCAGCCGATGCAGTTTATTACGGATCGTTGCCCCTTTGA 1050 0.4895 MAIAATISIPLTSPTRRTLASSVNNLSPRSTLPTPQRTFKYPNSRLVASSMSTETAVETSSASFLQNAESGGFLHFAKYHGLGNDFVLIDNRDSSEPRISAEKAVQLCDRNFGIGADGVIFVLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFVSQLENLHGGHSFTIHTGAGLIIPEVLEDGNIKVDMGEPILKASDVPTKLPANKDNVVVKSQLVVDGVFWHVTCVSMGNPHCVTFSREGSQNLLVDELKLAEIGPKFEHHEFVQVLSSSHLKMRVWERGAGATLACGTGACATVVAAVLEGRAGRNCTVDLPGGPLQIEWREEDNHVYMTGSADAVYYGSLPL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0070 349 Hamap Diaminopimelate epimerase [dapF]. 74 349 IPR001653 GO:0008837|GO:0009089
Aed4g0070 349 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 35 348 - -
Aed4g0070 349 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 47 204 - -
Aed4g0070 349 SUPERFAMILY Diaminopimelate epimerase-like 215 346 - -
Aed4g0070 349 Pfam Diaminopimelate epimerase 230 340 IPR001653 GO:0008837|GO:0009089
Aed4g0070 349 Pfam Diaminopimelate epimerase 76 196 IPR001653 GO:0008837|GO:0009089
Aed4g0070 349 SUPERFAMILY Diaminopimelate epimerase-like 74 203 - -
Aed4g0070 349 TIGRFAM DapF: diaminopimelate epimerase 75 347 IPR001653 GO:0008837|GO:0009089
Aed4g0070 349 ProSitePatterns Diaminopimelate epimerase signature. 137 151 IPR018510 GO:0005737|GO:0008837|GO:0009089
Aed4g0070 349 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 208 333 - -
Aed4g0070 349 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 35 348 IPR001653 GO:0008837|GO:0009089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0070 K01778 - gmx:100784731 628.246