Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0058 ATGATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTTTCAGCATGGATCAACCCTCTTCTTCTTCCATTGCCAATAACACAACTCAATTTGGTGGCAGAGCCATTGACCGCCACAACCCCATCATCACAGATCCAAGAAGAACACCTTCCAGAGACATCATTGCTCCTAGCTCTTCTTCTCAGCCCCCCAGTGACCCCAAACTTTTGTTGCATGATCATCATCTTCCAAAGGCCAAGAAAAGTGGCCAGAAGAAGAAGAAGAATGCTGCTACAATTACAAAGGGTCAACCTTTGCATGATCAGAAGAAGAAAAGCACCACTGAAGGAAAGTTGAGTGAACACATAAGCAACAATTACTCCTCAAAACCAATTGATAGCATTCTGAGGAGGAGTTGGGCTAGGCCACCTTCTGATTTAGTCACTCCTCCTGGCTCTTCAAGATATTTGCTCGCTCACACTCCTTCCTTGGATCGTGGTGTTTCATCACTTTATGATCCTGTTGATAAGGACAAAGCTCAAGTTGTAGAATTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAGGTGAGGAAACATCTCTCTAGAATGCGAGGAGTTAAGTCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTAGTTGGAGATGTGACTCCTTTGAGCGTGTTGACAAGCATATCAAAGGTGAAAAATGCACAATTTTGGCCAGAATCTGCTTCAGTGATTGGATCCGCTACACCAGAAACAAAGACAACTAATTTGATCTAA 789 0.4385 MMKGIDIFCASQASTAICFSMDQPSSSSIANNTTQFGGRAIDRHNPIITDPRRTPSRDIIAPSSSSQPPSDPKLLLHDHHLPKAKKSGQKKKKNAATITKGQPLHDQKKKSTTEGKLSEHISNNYSSKPIDSILRRSWARPPSDLVTPPGSSRYLLAHTPSLDRGVSSLYDPVDKDKAQVVELRVSLHCKGCEGKVRKHLSRMRGVKSFNIDFAAKKVTVVGDVTPLSVLTSISKVKNAQFWPESASVIGSATPETKTTNLI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0058 262 Pfam Heavy-metal-associated domain 183 229 IPR006121 GO:0046872
Aed4g0058 262 MobiDBLite consensus disorder prediction 24 39 - -
Aed4g0058 262 MobiDBLite consensus disorder prediction 24 126 - -
Aed4g0058 262 PANTHER COPPER CHAPERONE 2 173 - -
Aed4g0058 262 PANTHER COPPER CHAPERONE 178 258 - -
Aed4g0058 262 PANTHER OS08G0405700 PROTEIN 2 173 IPR044526 -
Aed4g0058 262 PANTHER OS08G0405700 PROTEIN 178 258 IPR044526 -
Aed4g0058 262 ProSiteProfiles Heavy-metal-associated domain profile. 186 236 IPR006121 GO:0046872
Aed4g0058 262 SUPERFAMILY HMA, heavy metal-associated domain 179 236 IPR036163 GO:0046872
Aed4g0058 262 CDD HMA 182 235 IPR006121 GO:0046872
Aed4g0058 262 Gene3D - 175 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0058 Aed-Chr4 381735 385134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0058 - - gmx:100810015 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0058 4 381735 385134 Aed8g0342 8 2828965 2832212 PCT