Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0046 ATGCCTCGCCATGATGATAAATATGGTAATACCCGCCTCTATGTTGGACGCTTGTCGTCGAGGACTCGTTCCCGTGATCTGGAGCGTGCTTTCAGCAGATATGGAAGGGAGCGTAGTTATGATAAGTTGCCGTGGGGCGTCCACCATTTTAATGCTGAAAACTTATGGGGTGGTAAACAGGTTTCTGAGGTTTTCTCTAAACCTGGAGGTCTGTGTTGGGAGGTTGGCCTTGGTGGAATTGATGGAAATTCCTGTCGAGTGTTGACTTTGGCGATTCTTTCTGTAATTTCAATTTCTCCTCATTCCTTTGCTCTGAGGTGGCTTTTAGAATCTGCTTGGAGGAATTCAGTTGAATTTAGTGATCCACGAGATGCTGATGATGCTAGATATAATTTGGATGGTCGTGATGTTGAAGGAAGTCGTATTATTGTGGAATTTGCCAAGGGGAACTGGTCATCTCATTTACGTGGACGGAGTCTTTCACGTTCACCGGTCAGGTCACGTTCTCCTCGTCGTGGCAGAAGCAGGGACCGAAGCTACAGCCGAGACCGCAGCTACAGCCGATCGAGATCCCCGGTCAGAAGAGAACGAAGTCCGGTTTCGGAAGATAGATCACAGAGTCCTCAGCCCTCCAAGATAAGGAAGCGTAGTGTATCACCTGACCAGAGTAGCCCACAGAAGAGAGGTGGCACATCTCCTGGCAAAGAGAGGCTGGCCACCCGACAAGATGGGTCTGACTGCAGTGATGGTGGTCCTAGAGGGAAAAGTAGAAGCCCTGCTAGCCCTGCAAGGGATCGTGAGGAGGGGGGCTATGATAGCCCTAAAGTTAATGGACGTAGCCGTAGCCCCAGCCGGAGCCCTAGGGATGATGACAGGAGCCCCATTGATGAAGATGATGACAACCAGCGTCGCTCACAGTCACCTTGA 927 0.5049 MPRHDDKYGNTRLYVGRLSSRTRSRDLERAFSRYGRERSYDKLPWGVHHFNAENLWGGKQVSEVFSKPGGLCWEVGLGGIDGNSCRVLTLAILSVISISPHSFALRWLLESAWRNSVEFSDPRDADDARYNLDGRDVEGSRIIVEFAKGNWSSHLRGRSLSRSPVRSRSPRRGRSRDRSYSRDRSYSRSRSPVRRERSPVSEDRSQSPQPSKIRKRSVSPDQSSPQKRGGTSPGKERLATRQDGSDCSDGGPRGKSRSPASPARDREEGGYDSPKVNGRSRSPSRSPRDDDRSPIDEDDDNQRRSQSP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0046 308 MobiDBLite consensus disorder prediction 174 202 - -
Aed4g0046 308 SUPERFAMILY RNA-binding domain, RBD 5 150 IPR035979 GO:0003676
Aed4g0046 308 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 6 155 - -
Aed4g0046 308 MobiDBLite consensus disorder prediction 259 274 - -
Aed4g0046 308 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR RS2Z32 6 155 - -
Aed4g0046 308 MobiDBLite consensus disorder prediction 203 230 - -
Aed4g0046 308 MobiDBLite consensus disorder prediction 154 308 - -
Aed4g0046 308 Gene3D - 2 159 IPR012677 -
Aed4g0046 308 MobiDBLite consensus disorder prediction 282 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0046 Aed-Chr4 307449 310884 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0046 K12896 - gmx:100813237 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0046 4 307449 310884 Aed4g0046 4 307449 310884 ECH