Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2673 ATGAAGAGTCTCCTCTTCTTTTTGTTCCTGTTGATAGTCTCCTCCGCCACCGCTAGCGTGCCCGCTCACAACATAACGCGCATGCTGGCCAAACACCCTGGCTTCTCAACCTTCAACCACTACCTGTCGGTGACACACCTCGCTGAAGAGATTAACCGGAGACAGACCATAACCGTGCTGGCCTTGGACAATGACGCCATGTCATCCCTCCTCGACAAGCACTTCTCGATCTCCACCATCAAGAACGTCCTCTCCCTCCACGTCCTCGTTGACTACTTCGGCGCCAAAAAGCTCCACCAGATCAACAACAGCACCACCCTCGTCTCCTCCATGTACCAGGCCACCGGTTCCGCCTCTGGCACCGCCGGCTACGTCAACATCACCAACCTCAAGGCTGGCAAGGTCGGTTTCGCCGCCGAAGACAACGACGGCTCACTCCACTCCTTCTACGTCAAATCCGTCCAAGAGTTGCCCTACTACATCTCCGTCCTCCAAATAAGCGCCGCCATAAGCTCCGTTGAAGCGGAGGCCCCTACCGCCGCCCCCTCCGACATCGACCTGATCTCCATAATGTCGAAGCAAGGGTGCAAGGCCTTCGCAGACCTTCTAAGAGGTTCGAAAGCGCTTCCAAGCTTCAAGGAAAACCTTGACGGCGGGCTAACGGTATTCTGCCCCACCGACAGCGCCGTGAGTGGATTCGCGCCAAAGTACAAGAACCTGACAGAGGCTCAGAAGGTTTCCCTTCTGTTATACCACGCGACTCCCGTTTACGAGTCTCTGCAGATGCTCAAGTCCAGCAACGGCATCATGAACACTCTGGCCACCGAGGGAGCCAACAAGTACGACTTCACCGTCAAGAGCGAAGGCGAAGACGTTAGTCTCAAGACTAAACTCAATACAGCGACCATAGTAGGGACATTGATAGATCAGGATCCCTTCGTGGCTTATAAGATTAACAAGGTTCTCATGCCCAGAGAGTTGTTCAAGGCCAGCGACGTCCCACAAGAAGACGAAGCACCTGCAGAGTCGCCTAAGCCTTCCAAGAAGAAGAAGAAGAATAAGAATAGCGACGCGGCCGATTCACCGGCGGACGGACCCAGCGACGATTCCGAAGATCAGAAGGCTGCTGATGAAGACAGCAATGGAGTAACTGGATTGCACGTCAGATTCCTTATGTTGTTCTTCTCTTTTACTATCTCCTTCTTTTTGCTTCTATGA 1218 0.5353 MKSLLFFLFLLIVSSATASVPAHNITRMLAKHPGFSTFNHYLSVTHLAEEINRRQTITVLALDNDAMSSLLDKHFSISTIKNVLSLHVLVDYFGAKKLHQINNSTTLVSSMYQATGSASGTAGYVNITNLKAGKVGFAAEDNDGSLHSFYVKSVQELPYYISVLQISAAISSVEAEAPTAAPSDIDLISIMSKQGCKAFADLLRGSKALPSFKENLDGGLTVFCPTDSAVSGFAPKYKNLTEAQKVSLLLYHATPVYESLQMLKSSNGIMNTLATEGANKYDFTVKSEGEDVSLKTKLNTATIVGTLIDQDPFVAYKINKVLMPRELFKASDVPQEDEAPAESPKPSKKKKKNKNSDAADSPADGPSDDSEDQKAADEDSNGVTGLHVRFLMLFFSFTISFFLLL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2673 405 MobiDBLite consensus disorder prediction 332 346 - -
Aed3g2673 405 Gene3D FAS1 domain 166 325 IPR036378 -
Aed3g2673 405 SUPERFAMILY FAS1 domain 179 325 IPR036378 -
Aed3g2673 405 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 397 IPR033254 -
Aed3g2673 405 ProSiteProfiles FAS1/BIgH3 domain profile. 22 153 IPR000782 -
Aed3g2673 405 SUPERFAMILY FAS1 domain 29 141 IPR036378 -
Aed3g2673 405 Gene3D FAS1 domain 22 146 IPR036378 -
Aed3g2673 405 MobiDBLite consensus disorder prediction 332 379 - -
Aed3g2673 405 ProSiteProfiles FAS1/BIgH3 domain profile. 183 322 IPR000782 -
Aed3g2673 405 SMART fasc_3 221 325 IPR000782 -
Aed3g2673 405 Pfam Fasciclin domain 196 324 IPR000782 -
Aed3g2673 405 Pfam Fasciclin domain 34 114 IPR000782 -
Aed3g2673 405 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 3 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2673 Aed-Chr3 28437943 28439160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2673 - - gmx:100805178 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2673 3 28437943 28439160 Aed3g2673 3 28437943 28439160 ECH