Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2672 ATGCTATCACATGCAACTGCAATTTCCTTTCCAAAAAGTAGTTGGACCAAAATGGAATGTGAAAGGATTGAATTGCTTAGTGGAGTTGAGGATGATCATGGAGGAGTGGTGGTAAACTTGGAGAACCCTATCCCTATGGATTCTACGCTCTTCTCTTCTATATTGCAAGCTTCAATTTTCAATTGGACTCAACAGGTACAATATTACATTTACTTTTTCAATTTCACAGTAATAAATTCCAAACTTGTTTTGCAGGGAAAAAAGGGGGTCTGGATCAAGTTGCCCATACAACATTCTAATCTTGTTGATCCTGCGGTGAAGGCTGGATTTAGGTACCACCATGCTGAGGCTGATTACTTGATGCTTGTACGTTGGATTCCAGATACTACTCCTCATACCCTTCCTGCAAATGCTTCACATCGCGTTGGTGTTGGTGCTTTTGTCCTCAACAACAACAACGAGGTGCTTGTGGTTCAAGAAGCAGGTGGCAAATTCAGAGGCACAGGCGTATGGAAGATGCCTACAGGAGCTGTTAATGAAGGTGAGGATCTCTGTGAAGCTGCAATTAGAGAAGTGAAAGAAGAAACAGGGATAGAGACAAAGTTTGTTGAAGTTTTAGCATTCAGGCAAAGCCATAAGTCGTTCTTCGAGAAATCAGATTTGTTCTTTGTTTGCATGTTGCAACCTCAATCGTTTGGCATTCAAAGTCAGGCTTCAGAAATTGCGGCAGCGAAGTGGATGCCAATTGAAGAATACGCTGGGCAGCCTTTTGTGCAAAAAAATGAGCTCTTTGAATTTGTTACAAAAATATGCTTTTCAAAGTTGGATGGCAACTACACCGGTTTTTCCAACTTACTTACTTGTACATCTTCTGGCAAAAAAACCTATCTGTATTTTAACAACGCCCGGCCTGACAGCCTTTTGTTAGCTCCCAAACAGGACCAAGCTTGA 951 0.4154 MLSHATAISFPKSSWTKMECERIELLSGVEDDHGGVVVNLENPIPMDSTLFSSILQASIFNWTQQVQYYIYFFNFTVINSKLVLQGKKGVWIKLPIQHSNLVDPAVKAGFRYHHAEADYLMLVRWIPDTTPHTLPANASHRVGVGAFVLNNNNEVLVVQEAGGKFRGTGVWKMPTGAVNEGEDLCEAAIREVKEETGIETKFVEVLAFRQSHKSFFEKSDLFFVCMLQPQSFGIQSQASEIAAAKWMPIEEYAGQPFVQKNELFEFVTKICFSKLDGNYTGFSNLLTCTSSGKKTYLYFNNARPDSLLLAPKQDQA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2672 316 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 225 249 IPR003293 -
Aed3g2672 316 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 98 116 IPR003293 -
Aed3g2672 316 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 137 155 IPR003293 -
Aed3g2672 316 PANTHER NUDIX FAMILY HYDROLASE 17 303 - -
Aed3g2672 316 PRINTS NUDIX hydrolase family signature 171 185 IPR020476 -
Aed3g2672 316 PRINTS NUDIX hydrolase family signature 185 200 IPR020476 -
Aed3g2672 316 SUPERFAMILY Nudix 107 262 IPR015797 -
Aed3g2672 316 ProSitePatterns Nudix box signature. 176 197 IPR020084 GO:0016787
Aed3g2672 316 ProSiteProfiles Nudix hydrolase domain profile. 139 271 IPR000086 -
Aed3g2672 316 Pfam NUDIX domain 140 253 IPR000086 -
Aed3g2672 316 Pfam Nudix hydrolase domain 84 126 IPR040618 -
Aed3g2672 316 CDD Nudix_Hydrolase_12 140 271 - -
Aed3g2672 316 PANTHER NUDIX HYDROLASE RELATED 17 303 IPR003293 -
Aed3g2672 316 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 141 274 - -
Aed3g2672 316 Gene3D - 23 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2672 Aed-Chr3 28435172 28439154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2672 - - gmx:100818821 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2672 3 28435172 28439154 Aed3g2672 3 28435172 28439154 ECH