Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2613 ATGTCTAATTCTCTTGTAGGATCTGTGATGTTAGCCATTCCGGAACCACATTCTTGTAAGAAAACATGCAGCAGCAAGGATAATAATAATAATAATAATAAAGCCACCACAGAAATAGATACCCCTCAGAATTCTGTCACATTTGTTTATCTAACCAAAGTAGCAGAATTATTGCGAAGTGTAACAGTTTCATGGTGCAAGGACCACACGGATCATTTCCTTTCCATGAGCGTGGACAACACTTTGGAAGAGAACAAGTACACCTGCAGGATTGATTTGGAATCGGGGCATTCTTGGGGTAAAAAGGGTCTCAAATCATTTGACATAGCAGGTGCAAGAGTAGACATTTTCTGGGATTTTCGACGCGCGAAATTCCCCGACACAAGTCCACAGCCTTGCTCAGGTTATTACGTTGCCTTGGTTTACAAGAAAGAGGTGCTTTTGTTGTTGGGAGATTTGGAGAAGGATGCCTATGAAAGAACAAAATCAAAAGCATCCCCAGATGAGGTTACCTTGTTGTGCAAGAGAGACAATGTGTATGGGAAGAAAATGTTTTGTACCAGAGCCATTCTGGAAGATGGTAAGACAGAATATGATGTTGTGATTGAGACTTCCCTTTCTGGGCCTGATGATCCAGAAATGTTGATTAGCATAGATGGGATGTTGGCCAGTAGAATAATGAACTTGCATTGGAGATTCAGAGGGAATGAAATTGTGATGGTGAATAATTTTCCTGTGCAAATCTTTTGGGATGTGCATGATTGGCTTTTCACCAATGCTGACCTTGGTGTAGGTCCTGCCTTCTTTGTTTTCAAGCCAGTCTTTTTGGAAACTACTACTACTGAAAGAAGTGGAGGAGATAGTAGCAGCAGACGTGAATTACTAGAGGAGACTTCATCCACCCAAGGACCCTTTGGAAGTCTCAGATTGTACATTGCTAGCACATCCTGCAGAGTGAAAATACCTGAAACTGCTCTGCCACTGAAAAGCTTGGGATATTGTAGCTGTCCTGATGTTAATGTGCTCAAGATAAATGGTGGAAAAGATGTGCATGCGACAATTACACGTTGTGAATCTTCTCAAAATCCCAATGAAATTTGTCCCGACTTATTATTTGATGACAGTGAAGAAGGTTCTTTTGATCAAATGGAAGAGGTTGGAGAGTTGACAATCCATGAGGGAGGAGACTCTTGTGACCAGGAATTGATACAAATTGACAAATTTACAAGTGATGTTGAGGAAGCTGCTATTAAATTACTTGCAGCTAGGGCACTCACAGCACTTGAGTTGAGAAAGAAATTGCTTGGAAAGAGATTCTCTCCTGATGTAGTGGAGGCAGTGATGAACAAGTTCCAGAGAAGAGGGTTCATCAATGATAGATTGTATGCTGAAACATTTTCTCAATCTAGATGGACTTCGTCAAGTTGGGGGCCAAGGCGGATCAAACAAGCACTGTTCAAGAAGGGAGTTAGTCAAGCTGATGCTGAGAAGGCAGTTGAAGTGGTCTTTAAGGACAATGATTGTGCTGAAGATCACAAGTCAGTTATTGGCTTGTCAAAACATTCCATGGATCATCTTTATACTCAGGTCTCAAAGCAGTGGTTCAGAGGTGAGAATGTGCCCAAGGAGACAAGGAAATCAAGAATTGTTCGGTGGCTTCAGTACCGTGGCTTTGACTGGAATGTCATTAGTTTCATACTAAAGAAATTAGACAGGCAGGACCAGAATTCTCCTTAG 1737 0.4157 MSNSLVGSVMLAIPEPHSCKKTCSSKDNNNNNNKATTEIDTPQNSVTFVYLTKVAELLRSVTVSWCKDHTDHFLSMSVDNTLEENKYTCRIDLESGHSWGKKGLKSFDIAGARVDIFWDFRRAKFPDTSPQPCSGYYVALVYKKEVLLLLGDLEKDAYERTKSKASPDEVTLLCKRDNVYGKKMFCTRAILEDGKTEYDVVIETSLSGPDDPEMLISIDGMLASRIMNLHWRFRGNEIVMVNNFPVQIFWDVHDWLFTNADLGVGPAFFVFKPVFLETTTTERSGGDSSSRRELLEETSSTQGPFGSLRLYIASTSCRVKIPETALPLKSLGYCSCPDVNVLKINGGKDVHATITRCESSQNPNEICPDLLFDDSEEGSFDQMEEVGELTIHEGGDSCDQELIQIDKFTSDVEEAAIKLLAARALTALELRKKLLGKRFSPDVVEAVMNKFQRRGFINDRLYAETFSQSRWTSSSWGPRRIKQALFKKGVSQADAEKAVEVVFKDNDCAEDHKSVIGLSKHSMDHLYTQVSKQWFRGENVPKETRKSRIVRWLQYRGFDWNVISFILKKLDRQDQNSP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2613 578 Hamap Regulatory protein RecX [recX]. 395 574 IPR003783 GO:0006282
Aed3g2613 578 Gene3D - 520 577 IPR036388 -
Aed3g2613 578 PANTHER EXPRESSED PROTEIN 21 302 IPR008586 -
Aed3g2613 578 Gene3D - 413 456 IPR036388 -
Aed3g2613 578 Pfam RecX family 437 569 IPR003783 GO:0006282
Aed3g2613 578 Gene3D - 458 500 IPR036388 -
Aed3g2613 578 PANTHER KINESIN-LIKE PROTEIN (DUF868) 21 302 - -
Aed3g2613 578 MobiDBLite consensus disorder prediction 280 301 - -
Aed3g2613 578 Pfam Plant protein of unknown function (DUF868) 42 287 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2613 Aed-Chr3 28074552 28080132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2613 43 272 EF-hand Containing Proteins AT3G04860 35.470 8.46e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2613 - - gmx:100783629 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2613 3 28074552 28080132 Aed3g2613 3 28074552 28080132 ECH