Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2604 ATGGCTGCAGGGGTCGTCCAAGACTCCAAATTTGTCATGCCTGATGAGGTGGATGATTCTCCCATTGAGCAGGTTCGGCTTACGGTTTCAATAAGCGACGACCCAACACAGCCAGCGCTGACATTCAGAACATGGACTCTGGGATTGGTCTCATGCATTATCCTCTCATTTGTCAACCAATTCTTCGGCTACAGAAGCAACCCACTCTTCATTTCCTCGGTCTCAGCCCAGATTCTTTCTCTCCCTGCTGGCAAATTAATGGCAGCAACCCTTCCCACAAAACAAATTCGTGTCCCCTTCACCACATGGTCTTTCTCATTCAACCCTGGCCCCTTCAATCTAAAGGAGCATGCTCTCATCACCATCTTTGCCAGCGCTGGATCTAGTGGTGTTTATGCCATCAACATTATCACTATTGTTAAGGCTTTCTACCACAGGAACGTCCACCCACTTGCCGCTTTTCTCTTGGCACTTTCCACCCAGATGCTTGGTTATGGATGGGCTGGGATTTTCAGGAGATTCCTTGTGGATTCCTCGTACATGTGGTGGCCTACAAACCTTGTCCAAGTGTCTCTATTCAGGGCATTTCATGAAAAGGAGAAAAGGCCTAAAGGAGGAAGCACAAGGCTGCAATTCTTTTTCATGGTCTTTGTATCAAGCTTTGCTTATTACATAATTCCAGGGTACTTTTTCCAAGCAATAACAGCAATCTCATTTGTTTGCTTGATTTGGAAAAAGTCCATCACTGCTCAACAAATTGGTTCGGGCTTGAAAGGCCTTGGCATTGGTTCATTTGGCATTGACTGGAACACCGTGGCTGGCTTCTTGGGGAGTCCTTTGGCTGTTCCTGGCTTTGCCATCGCCAACATGCTGGCTGGATTTGTGCTCTTTATATATGTTATTGTTCCCATTTCCTATTGGAACAACTTGTATGATGCCAAGAAGTTCCCCATCATCAGTTCTCACACATTTGATTCCTCTGGCGCAACATATAATGTCAGTCGGATTTTGAATGCTAAAACTTTTGAAATTGATATGGATAGTTATAACAATTACAGCAAGCTCTATCTCAGTATCACATTTGCATTCGACTACGGATTGAGCTTTGCAACTCTCACAGCTACTATTTCACATGTTGCCCTCTTCCATGGAAAAACGATTTATCGGATGTGGAAGAAAACAACAAGTGCACTAAAAGGACAAGAAATTGGAGATGTGCACACGAGAATTATGAAGAGAAACTATGAACAAGTGCCTGAATGGTGGTTTGTGAGCATTTTGCTCCTAATGATGGTTGTAGCCTTGATAACTTGTGAAGGCTTTGGCAAGCAACTCCAACTGCCATGGTGGGGAGTCATAATGTCTCTCGTAATTGCGTTAGTTTTCACATTGCCAATTGGGGTCATTCAAGCAACAACAAACACGCAAGTTGGACTGAACGTGATTACAGAGTTAATAATTGGGTACCTTTACCCAGGAAAGCCACTTGCTAATGTAGCCTTCAAGACTTACGGGTACATCAGCATGTCACAGGCACTGCTCTTCCTTCAAGACTTCAAATTAGGCCACTATATGAAAATCCCTCCAAAGTCTATGTTCGTGGTGCAGTTGGTAGGTACCATAGTTGCTTCAAGTGCGTACTTTGGCACAGCATGGTGGCTTCTGACGACAGTTCCAAACATATGCGATGAAGCAAATTTGCCAGAAGGTAGTCCATGGACATGCCCTGGTGACGATGTGTTCTATAACGCATCGATAATATGGGGAATAGTGGGGCCACAGAGAATGTTTACGAAGGATGGGATATACCCTGGGATGAATTGGTTTTTCCTGATTGGTCTACTTGCTCCTGTTCCAGTGTGGTTTCTTGCTCGCAAATTCCCAAACCACAAGTGGATTGAGCTCATAAACATGCCTTTAATCATTGCTGGTGGTGGTGGCATTCCGCCAGCCAGATCAGTGAACTACATAACTTGGGGAGCTGTGGGAATCTTCTTCAATTTCTACGTTTACAATAAGTTCAAGGTATGGTGGGCTAGACACACTTACATCCTCTCAGCTGCTTTAGATGCTGGTGTTGCTTTCATGGGTGTCATTCTCTATTTTGCACTTCAAAATTATGATATCTTTGGTCCAATATGGTGGGGTCAAGATGCTGATGACCACTGCCCTTTGGCCAAATGCCCCACAGCTCCAGGCATAATTGCCCATGGCTGTCCTGTTCTCTAA 2229 0.4459 MAAGVVQDSKFVMPDEVDDSPIEQVRLTVSISDDPTQPALTFRTWTLGLVSCIILSFVNQFFGYRSNPLFISSVSAQILSLPAGKLMAATLPTKQIRVPFTTWSFSFNPGPFNLKEHALITIFASAGSSGVYAINIITIVKAFYHRNVHPLAAFLLALSTQMLGYGWAGIFRRFLVDSSYMWWPTNLVQVSLFRAFHEKEKRPKGGSTRLQFFFMVFVSSFAYYIIPGYFFQAITAISFVCLIWKKSITAQQIGSGLKGLGIGSFGIDWNTVAGFLGSPLAVPGFAIANMLAGFVLFIYVIVPISYWNNLYDAKKFPIISSHTFDSSGATYNVSRILNAKTFEIDMDSYNNYSKLYLSITFAFDYGLSFATLTATISHVALFHGKTIYRMWKKTTSALKGQEIGDVHTRIMKRNYEQVPEWWFVSILLLMMVVALITCEGFGKQLQLPWWGVIMSLVIALVFTLPIGVIQATTNTQVGLNVITELIIGYLYPGKPLANVAFKTYGYISMSQALLFLQDFKLGHYMKIPPKSMFVVQLVGTIVASSAYFGTAWWLLTTVPNICDEANLPEGSPWTCPGDDVFYNASIIWGIVGPQRMFTKDGIYPGMNWFFLIGLLAPVPVWFLARKFPNHKWIELINMPLIIAGGGGIPPARSVNYITWGAVGIFFNFYVYNKFKVWWARHTYILSAALDAGVAFMGVILYFALQNYDIFGPIWWGQDADDHCPLAKCPTAPGIIAHGCPVL 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2604 742 Pfam OPT oligopeptide transporter protein 40 703 IPR004813 GO:0035673
Aed3g2604 742 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 18 707 IPR004648 GO:0055085
Aed3g2604 742 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 16 742 - -
Aed3g2604 742 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 24 705 IPR004813 GO:0035673
Aed3g2604 742 PANTHER ISP4 LIKE PROTEIN 16 742 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2604 Aed-Chr3 28010176 28013817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2604 18 742 Organic Solute Cotransporters AT4G26590 68.138 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2604 - - gmx:100776230 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2604 3 28010176 28013817 Aed3g2604 3 28010176 28013817 ECH