Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2586 ATGGAGGGAAGGAGGAGGTTCCAATCGGAGTCACAACCACAACCAAAAAGCGTGATTCTGCTTACAAAGATCCAAGATTTCACTCGAGCTTTGCTCGCAGACCTCACCAACGGACGTTCACCGCTCATCATCATCGATCGCTTCAGAAGCTACTGCACACTTTCCAACTCCAACTGCTTCTGTGCCTCCGATTTGCCCTGCGGAAAGGATCTTCTCACACTCCGCAGAAAATCCCACGCGCACAGACTAGTCGTCATGTTGAGAGTGATGCTGATAGTTCAGAAACTTTTGCAAGAGAACAAGCATAGTTCCAAGAGAGATATTTATTACACCTATCCTTCCGTATTTTTGGATCAGTCAGTGGTTGACCAAGCAGTTAATGATATATGTATTCTTATGCAATGCAGTCGCCATAACCTTAATGTGGTTTCTGCAGGGAATGGGTTAGTTATGGGCTGGATAAGATTCTCTGAAGGAGAAAGAATATCTGATTGCATTAGTTCCCCTAACACTGCCCACCCTGTTCCTGTTCATGTTGAAGAAGTTCAAGTTTTCCAAAGACTAGCAAACGATCAATTCTGCAATGCAAATCATTGTATTGTCATCACTGGAAGAGGCTACCCGGATATTCCTACAAGAAGGTTTTTGCGGCTTCTGGTTGAGAATTTGCGCCTGCCTACTTATTGCTTGGTAGATTGTGATCCTTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCAATGCAAATGGCGTATGACACTAAACATCTTCGTGTCCCAGAGATACAGTGGCTTGGAGCTTTTCCTTCAGATTCTGAGAGATATTTTGTTCCAAATCAGTGTCTCCTTCCTTTGACTGCTGAAGACAAAAGAAAAGTTGAAGCCATTTTACTTAGATGCTACCTTGAAAGGGAGGTACCACAATGGAGGTTGGAACTACAGTTGATACTGGAAAAAGGAGTAAAGTTTGAGATTGAAGCCTTATCTGTGCACGCACTTTCATTCTTGACGGAGTCTTACATACCATCTAAAATTGAAGGTAAATTGATAATGTAG 1059 0.4259 MEGRRRFQSESQPQPKSVILLTKIQDFTRALLADLTNGRSPLIIIDRFRSYCTLSNSNCFCASDLPCGKDLLTLRRKSHAHRLVVMLRVMLIVQKLLQENKHSSKRDIYYTYPSVFLDQSVVDQAVNDICILMQCSRHNLNVVSAGNGLVMGWIRFSEGERISDCISSPNTAHPVPVHVEEVQVFQRLANDQFCNANHCIVITGRGYPDIPTRRFLRLLVENLRLPTYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAFPSDSERYFVPNQCLLPLTAEDKRKVEAILLRCYLEREVPQWRLELQLILEKGVKFEIEALSVHALSFLTESYIPSKIEGKLIM 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2586 352 SUPERFAMILY DNA topoisomerase IV, alpha subunit 80 347 IPR036078 GO:0003677|GO:0005694
Aed3g2586 352 PRINTS DNA topoisomerase VI subunit A family signature 105 116 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed3g2586 352 PRINTS DNA topoisomerase VI subunit A family signature 200 221 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed3g2586 352 PRINTS DNA topoisomerase VI subunit A family signature 232 248 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed3g2586 352 PRINTS DNA topoisomerase VI subunit A family signature 119 136 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed3g2586 352 Gene3D - 147 351 - -
Aed3g2586 352 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 15 348 IPR002815 GO:0003677|GO:0003918|GO:0005694
Aed3g2586 352 PRINTS SPO11 homologue signature 111 131 IPR013048 GO:0003677|GO:0003918|GO:0042138
Aed3g2586 352 PRINTS SPO11 homologue signature 272 296 IPR013048 GO:0003677|GO:0003918|GO:0042138
Aed3g2586 352 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 15 348 - -
Aed3g2586 352 CDD TOPRIM_TopoIIB_SPO 179 336 IPR034136 -
Aed3g2586 352 Pfam Type IIB DNA topoisomerase 82 142 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Aed3g2586 352 Gene3D - 8 145 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2586 Aed-Chr3 27935131 27938244 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2586 K10878 - gmx:100813920 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2586 3 27935131 27938244 Aed3g2586 3 27935131 27938244 ECH