Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2566 ATGCTTCTAATTGCTTTTCCAGACGTCGAAGTCGAAGATCATCGCTGCAGCTCTGAAACTGTTCACACAAAGAAAGATAATCTGAAGAAAGCCTACGACGATCTTCAAACTCATTCCTCTCTTGTAACTTCATCCTCCACTATCTCATGGTCCCACCTCGACGCCCACTTCACCACCCTCCACACTTCCCTCTCGAAGCGCTTCCACCTCCTTCAGTCCCTCGAAGTCGAATCCCAACACACACCACCCTCATTGCCCAAAACCCCCGCCGAACAAATGATCACGCTCTGCGACAACATGGACGGAAAAGGGTTGAGGGACTACGTCGGAGAGCATTTAAAAGACAAGGCTGCGATAGAGGTCGCGCTTCAGAGTGCCCTCAAGCGTGCCTCCGATGCTGCGTCAATTCTTCTCGATTCGCTCGACGGTCTTCTGGGTGCCAATGCGCTGAAAGATGACAAGGAAGTACGCACGAGGAAGAGGAGTTGCAGTTTTTTGTTCAAGCAGTTCAGGGCTGCGTCTGTGTCTGTTAGCTTTAAGGTGAGGTTAAGAGCCCAGAGGTTGTGTGTGGAGTGGAAGGGAAGCTTGACGAGGGACGGTTGTGTTGATGGTGTTGGGGCTATGGCTTTCTTGCATTTTGTCGCGGCTTATGGCTTGCTCTCTCAATTGACCGTCAATGAGATTCTCACCTTCTCTGCTATAGCTGCTTCCATTGATGAACTTCCTGAGCTTTACTGGACTGCTGGTTTAACTGACAAAGTTCCAGGTCTTGTTCAGAAACTTATTAACAGGTGCAAACATATTCTGGCTGTCAAGTTTGTTTTTGAGTTCAATCTTGCTGATAAGATTCCACCAGTTCCCATTTTGAAAGCTCATGTGAATGAGTCTCAGAAACTTGCTAAAAGACTTTCTGAAGAAGGGAAGTCCCTTAGTGAGATCACAGCAAGAGAAATGCATGCGCTGAAATTGGCAATTAAGGTTATTGAGAGTCATAATCTTCAATCTGAATATCCACCTGAAAGCCTTCAACAGCGTATAGACCAATTGATGAATCATAAGGCAAATATAAAATATGCCGCATCAGCTTTTTCTGCAAGGCCTCCTCCACATCAGCAACAACAAAGTGGAATCAAGCATCCTTGA 1143 0.4654 MLLIAFPDVEVEDHRCSSETVHTKKDNLKKAYDDLQTHSSLVTSSSTISWSHLDAHFTTLHTSLSKRFHLLQSLEVESQHTPPSLPKTPAEQMITLCDNMDGKGLRDYVGEHLKDKAAIEVALQSALKRASDAASILLDSLDGLLGANALKDDKEVRTRKRSCSFLFKQFRAASVSVSFKVRLRAQRLCVEWKGSLTRDGCVDGVGAMAFLHFVAAYGLLSQLTVNEILTFSAIAASIDELPELYWTAGLTDKVPGLVQKLINRCKHILAVKFVFEFNLADKIPPVPILKAHVNESQKLAKRLSEEGKSLSEITAREMHALKLAIKVIESHNLQSEYPPESLQQRIDQLMNHKANIKYAASAFSARPPPHQQQQSGIKHP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2566 380 PANTHER FRIGIDA-LIKE PROTEIN 88 374 - -
Aed3g2566 380 PANTHER FRIGIDA-LIKE PROTEIN 20 82 - -
Aed3g2566 380 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 88 374 - -
Aed3g2566 380 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 20 82 - -
Aed3g2566 380 Pfam Frigida-like protein 88 359 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2566 Aed-Chr3 27831509 27838193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2566 - - gmx:100808558 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2566 3 27831509 27838193 Aed3g2566 3 27831509 27838193 ECH
Aed4g2413 4 26368173 26374166 Aed3g2566 3 27831509 27838193 PCT