Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2561 ATGAGGCAAAGCAGTAACGCTGAGAGTCGTTTCTCTGGCACCATTTCATCCTCATCTCTCAGAAACTTTCTTCCCAGATCACTCTCTTCCAAGAACAAACCTACTTCAAACCCTAAAATCCCAAATTCAGATGCAGAGAACACTCCCCCCACTGATCCCAACATCCAGATCAACCATGAACAAGCGTTGCCTTCCACAACCAAACAATCACAGTCCCAAACCTCAATTTCTCAGAACAACCTCAACCAATCCAAACCCCCTCTTGAATCAGACCCATCAGTCAAGGCAAGTGTTGTAGTACGAATCAGACCTACCAATGACAATGGAATAGAGGGAGATCAAACCGTTAAGAAGGTTTCTTCTGACACCTTGTGTCTTGGGGATAGGCAATTTACATTTGATTCAGTTTTCGATTCGAACACCAATCAGGAAGATATTTTTCAGTCAGTGGGTGTCCCCTTGGTTAAAAATGCTTTAGCTGGTTACAACACTTCAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCCCCAAGTGCCATGTTTGAGGAGCCCTCGCCCCACAGTCACAAGGGAATTGTTCCTCGGATCTTCCAAATGTTGTTTTCTGAGCTTGAGAGGGAGCAGCAAGTGTCAGAGGGGAAACAATTCAACTATCAATGTCGATGTTCTTTCCTTGAGATATACAACGAACAAATTGGGGATTTACTTGATCCAACCCAGCGGAACCTTGAGGCATGCATATGGCATCCTTTTGTGCTACAATTTATTATGAAAGATGATTCCAAAAATGCAATGTATATAGAGAATCTGACTGAGGAATATGTCACTAGCTATGATGATGTAACACAAATTCTGATTAAGGGCCTTTCAAGCCGAAAAGTTGGAGCGACAAGCTTAAATTCTAAGAGCTCTAGATCACATATAATTTTCACTTTTGTGATTGAATCTTGGTGTAAGGGAATATCATCAAAATTTTTCAGTAGTTCAAAATCTAGCAGAATTAGCCTTATTGATCTTGCTGGACAGGACAGGAACAAAGTTGAGGATGCAGGCAAGCAATGTCTAAAGGAAAGAAAGAATGTAAAGAAGTCCTTATCTCAGCTTGGGCACTTGGTTGATACCCTGACTAAAGAAGCTCACTCAGGAAAAGCAGAAGAAATTTCAAACAGGAATTCCTGTTTAACACGTTTACTACAAGAATCACTTGGTGGAAATGCTAAACTCTCATTAATCTGTTCCATCTCCCCTTATAACAAGAATAATGGTGAAACACTGCGCACACTCAGGTTTGGACAGCGAGTAAGAACCATTAGAAATGAACCTGTTATCAATGAAATAAAGGAGGATGATGTTAATGATTTAAGTGATCAAATCCGGCAACTGAAGGAAGAACTTATTAGAGCAAAGGCTGAGGTTCATAGCTCAAATGGAAGTAGAAATGGATACCTCCAAGTACAAAATGTACGGGACAGCCTTAATCAGTTGCGAGTCAGCTTAAACCGCTCTCTACTCCTACCTTGCATTGATAATGACACTGATGAAGAGGTAGTAAATGTGGACGAGGATGACATAAGGCAATTACGTCAGCAGATTGATGAACTGTATCATTCGTGTGAAGAGAACCCTAAAAGCATATCTGTCAGTGAAGATTGTGTCCAGTATTATTCTATTGCGGAAAATTGTGACACAGATATGACCAGTGGTGATGAAATTGAAAAAGAGGAAGTATGTTTTGGAGAAGCAATGAGTAAGCTATGTCCCGAGGAAAGTGAGGGATCAACTACCTCCTTGTATGCATCAGCAGATGACTTGGCATGCACAGTTAATGCCTCAAGGACAATTAAATCTTCATTCAGAGATAGCATTTCAGTTAGCTCATGTCGATCTCCAATACTTGGAGAACCACAGTTGTCTGAGTCTCCAAAAATCAAGAATGTCCAGAGGAAAAGTGTGGCTTATTCATCAAGTTGTCTTGGAAGTTGGAACAATGTGGCAGAGGAGAATATGAGTTCCAGTAATGATATATTAAGACAATCATTTAAAGAGGGTGAGCAGATGCGATCATCACTACGGTCAAGCAAGGTTTTCCAAGGTCCTACCGAATCCTTGGCAGCAAGCCTTCAGAGGGGATTGCAGATAATTGATTATCACCAACGAAACTCAGCAATAAACAAATCTTCGGCTTCCTTCTCTTTTGGGTGCTTAACACCTTGTCCCGAAGACAAGGATGATTCTTGTGATCAAATAATGCAACAGAAGAAATATTCTGTCGATGAAAGAACTGCTACCTTGCTTTGTGAATCTTGCTGTAAAAGAATAAACAACCAGGATTCTACTGAGGTTCAAGATAGCGTAAAGTCGAGGGTTGGAACAGCTGAAGCAGAAAATCCAGACGGACTGACAGATAAGGTTCCAAAAAGTATAATGGAAAACACAATCACGAGAGAACAGGAACTAGAGAATGTTTGCAAGGAGCAAGCTGCTAGGATTGAAGAACTAAATCAATTGGTGGAGAAATTGAAAGGAGAAATGGAAGTAAAATCTTCCATCATTGTATATGATCCAGAAAGCAATAAACAGACTAGGCATGAAGAAGAGTATAACTCATTGAAAGATGAAGACAAGCTTCCAAGGGGAACTTCCTTGGACAGGCATTTATCAGATATTATAGAGGAAAAATGTGAAATTAAAGAAGTCCAGGAAGAAGTAACTCAAAGGGACAGCTCTTTTGATGCAGCTGAGAAGGAAGTACTTCTTAAGGAGATTCAGAATCTAAGAAGCAAGCTGCAATTATGTAGTGATGTACCAGTTAAAAAGTCCACTGACAAACTAAGGTCATCCTTATCATTAATGTCAAGATCCATTCAACTCCGAAAAAGTGGTATATTTTCTCATGATAATGGTGGTGATGAGCTAGAGAAAGAGAGGGAGAGATGGACTGAAATGGAAAGTGAGTGGATTTGTCTTACTGACGAACTAAGAGTTGATCTTGAGTCCATCCGCCAGCGGGCAGAGAGGGTGGAGATGGAACTGAGTTTAGAGAAGAAGTGCACTGAAGAGTTAGACGATGCACTAAAAAGATCGGTTCTTGGACATGCTAGAATGGTCGAACACTATGTCGACCTCCAAGAAAAATATAATGATTTGGCTGCAAAGCACAATGCTATAATGGAAGGCATAGCAGAGGTGAAGAAAGCAGCGGCAAAGGCTGGAAAAAGGGGTCATGCTCGCTTTGCCAAATCTCTTGCTGCTGAGCTTTCTGCATTGAGGGTGGAGAGAGAAAGGGAAGCAAAATTCTTGAAAAAGGAGAACATGAATCTCAAGATTCAACTTAGAGAAACTGCAGAAGCTGTTCATGCTGCTGGAGAACTACTTGTCAGACTAAGAGAAGCTGAGCATGCAGTGTCTGTTGCAGAGGAGAGTTTCACAAAAGTGCAACAAGATAATGAAAAGCTAAAAAAGCAAATGGATAAGCTGAAAAGAAAGCACAAGATGGAGATTGTTACCATGAAACAGTACCTTGCAGAGAGCAAATTGCCAGAGTCTGCACTGCAGCCCCTATTTAAAGAGGATTCTGATGTTGCTCACAAGGATGCAACTTCCCACGACGATCAGGCATGGAGAGTAGAGTTTGGAGCAATCTATCAACAGCATTATTAA 3681 0.4094 MRQSSNAESRFSGTISSSSLRNFLPRSLSSKNKPTSNPKIPNSDAENTPPTDPNIQINHEQALPSTTKQSQSQTSISQNNLNQSKPPLESDPSVKASVVVRIRPTNDNGIEGDQTVKKVSSDTLCLGDRQFTFDSVFDSNTNQEDIFQSVGVPLVKNALAGYNTSILSYGQSGSGKTYTMWGPPSAMFEEPSPHSHKGIVPRIFQMLFSELEREQQVSEGKQFNYQCRCSFLEIYNEQIGDLLDPTQRNLEACIWHPFVLQFIMKDDSKNAMYIENLTEEYVTSYDDVTQILIKGLSSRKVGATSLNSKSSRSHIIFTFVIESWCKGISSKFFSSSKSSRISLIDLAGQDRNKVEDAGKQCLKERKNVKKSLSQLGHLVDTLTKEAHSGKAEEISNRNSCLTRLLQESLGGNAKLSLICSISPYNKNNGETLRTLRFGQRVRTIRNEPVINEIKEDDVNDLSDQIRQLKEELIRAKAEVHSSNGSRNGYLQVQNVRDSLNQLRVSLNRSLLLPCIDNDTDEEVVNVDEDDIRQLRQQIDELYHSCEENPKSISVSEDCVQYYSIAENCDTDMTSGDEIEKEEVCFGEAMSKLCPEESEGSTTSLYASADDLACTVNASRTIKSSFRDSISVSSCRSPILGEPQLSESPKIKNVQRKSVAYSSSCLGSWNNVAEENMSSSNDILRQSFKEGEQMRSSLRSSKVFQGPTESLAASLQRGLQIIDYHQRNSAINKSSASFSFGCLTPCPEDKDDSCDQIMQQKKYSVDERTATLLCESCCKRINNQDSTEVQDSVKSRVGTAEAENPDGLTDKVPKSIMENTITREQELENVCKEQAARIEELNQLVEKLKGEMEVKSSIIVYDPESNKQTRHEEEYNSLKDEDKLPRGTSLDRHLSDIIEEKCEIKEVQEEVTQRDSSFDAAEKEVLLKEIQNLRSKLQLCSDVPVKKSTDKLRSSLSLMSRSIQLRKSGIFSHDNGGDELEKERERWTEMESEWICLTDELRVDLESIRQRAERVEMELSLEKKCTEELDDALKRSVLGHARMVEHYVDLQEKYNDLAAKHNAIMEGIAEVKKAAAKAGKRGHARFAKSLAAELSALRVEREREAKFLKKENMNLKIQLRETAEAVHAAGELLVRLREAEHAVSVAEESFTKVQQDNEKLKKQMDKLKRKHKMEIVTMKQYLAESKLPESALQPLFKEDSDVAHKDATSHDDQAWRVEFGAIYQQHY 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2561 1226 MobiDBLite consensus disorder prediction 1 94 - -
Aed3g2561 1226 PANTHER CENTROMERE PROTEIN E 71 1226 - -
Aed3g2561 1226 Pfam Kinesin motor domain 101 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2561 1226 Coils Coil 823 857 - -
Aed3g2561 1226 PRINTS Kinesin heavy chain signature 394 415 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2561 1226 PRINTS Kinesin heavy chain signature 161 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2561 1226 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2561 1226 PRINTS Kinesin heavy chain signature 340 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2561 1226 PANTHER KINESIN-LIKE PROTEIN KIN-12F 71 1226 - -
Aed3g2561 1226 MobiDBLite consensus disorder prediction 864 886 - -
Aed3g2561 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 478 IPR027417 -
Aed3g2561 1226 MobiDBLite consensus disorder prediction 1 90 - -
Aed3g2561 1226 ProSiteProfiles Kinesin motor domain profile. 95 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2561 1226 Coils Coil 997 1017 - -
Aed3g2561 1226 Coils Coil 1090 1124 - -
Aed3g2561 1226 Coils Coil 451 478 - -
Aed3g2561 1226 Coils Coil 889 909 - -
Aed3g2561 1226 SMART kinesin_4 95 452 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed3g2561 1226 Coils Coil 1142 1176 - -
Aed3g2561 1226 Gene3D Kinesin motor domain 93 485 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2561 Aed-Chr3 27802599 27808651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2561 97 472 Miscellaneous Gene Families AT4G39050 35.509 1.41e-50 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2561 K10400 - gmx:100806960 2112.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2561 3 27802599 27808651 Aed3g2561 3 27802599 27808651 ECH
Aed4g2418 4 26413960 26419745 Aed3g2561 3 27802599 27808651 PCT