Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2557 ATGTGGAATCCACGCGCTCTTTCTGCGCCACTCGCTCTTCTTCTTCTTCTTCACTCGCTCTTTGCTCTTGTCTCTGCACAGAGATCTGCCTGGAACACTCTCAACGGAGGTCCGCCGTTGGTTGTAGCACGTGGTGGATTTTCAGGGATACTTCCTGATTCCAGTGATGCTGCCTATAGATTGGCAGTAATAACGAGTGAACCAGATGTCCATGTATGGTGTGATGTGCAATTAACAAAAGATGGAGTTGGGATTTGCCAACCAAGTATAGACCTTGCAAATTCTACTTACATCACGGAGGCTTACCCAAATAAAACCACAAGCTACTTAGTAAATGGTGTACCCACCAGTGGCTATTTTTCTCTGGATTACACCCTGAAGGACCTATCCAATGTCCTCTTAACTCAGGGAATATACTCTCGATCCATCCGGTTTGATGGTCTCAATTCTCTAATTCTTGCTGTGGATGATTTAGTTTCATTAGACCCAAAACCAAAAGGAATATGGTTGAATATTCAGCATGATGCATTCTACGCCCAACATAATTTGAGTATGAGAAACACTGTGCTCTCAGCTTCCAGAAGAATAGTTTTCAGTTATATCTCATCACCCGAGGTTGGTTTTCTGAGAAGTATAGCAGCACGCTTCAACCCAAAAACAACAAAATTGGTCTTCAGGTTTATGGGACAGAGTGATGTAGATCCATCAACCAACCAGACTTATGGTTCGCTTTTAAAAAATCTTACATTTATCAAGACATTTTCTTCTGGAATTCTTGTTCCAAAGGGATATATATGGCCTGTAGATGCATCTCTTTATCTACAACCACATACATCTTTGGTCTCGGATGCACATAAAGCGGGTCTGGAAGTTTTTGCATCAGATTTTGTGAATGATGTTCCATTTAGCTTTAATTACAGTTATGATCCTCTTTCCGAGTACCTTCAATTTGTCGACAATGGTGACTTCTCTGTTGATGGTCTGCTGACTGATTTTCCTGTAACTTCATTTGAAGCTATAGGTTGCTTTGCTCACCTAGGCACCAATGCTACAAAACAAGATAAAACTTTGGTTATCTCGAAATATGGAGCAAGTGGAGATTATCCTCCTTGTACTGACTTGGCATATCAAAATGCCGTATCTGATGGTGTGGATGTTCTTGACTGTCCTGTTCAAATGTCTAAGGATGGAACACCATTTTGCTTAAACTCCATTGATCTTATAGAGAGTACAACGGTTGCCCAATCAATCTTCAGCAAATTTGCCATGATTATCCCTGAGATCAAATCTAGCAGTGGCATATTTGCATTCAACTTGACATGGAATGATATAAAAAGTTTGACCCCCTCAATATTGAACCCCTTTGCAAAATACAGATTGTTCAGGAATCCAAAAAATAAGAATGCTGGGACATTGTTGACATTATCAGATTTTTTGTCCTTAACAAAAAATCAGACTTCTCTATCAGGTGTCGCAATCATTGTTGAGAATGCAGCCTATCTTGCAGACAAGCAAGGATTAAGTGTGATTGATGCAGTCATCGGTGCTTTGAGCAAAGCAGGTTATGACAAACCAGGACACCAAAAGGTTTTTATTCAATCCACTAATAGCTCTGTACTGCTGAAGTTCAAGGAGAAAACCAGTTATGAGCTTGTCTACAAGATTGACGAGACTGTTGGTGATGCTGCTAATGCAGCTGTTGAGGATATAAAAAGATTTGCTAGTGCTGTGGTTGTCAGCAAGGACTCCGTTTTTCCTAGCAATGATAAATTCCTGACAGGCTCTACGAAGACCGTGCCAAAGCTACTAGCTGCTAACCTCTCAGTTTTTGTAGAAACATTCAGCAATGAGTTTGTGTCTCAAGCATGGGATTTCTACTCAGATGCAACTGTTGAGATCAACTCATATGTTCAGGGAGCAGAGATTAATGGTATCATCACAGATTTCCCTAAAACTGCTGACAGATACAGAAGGAGCAAATGCTTAAGTTTGGGTGTCAAGAAACCTGTTTACATGGATCCTGTTCAACCAGGTGCTCTTTTTGGACTCATTACCCAAGATTTTTTGCCTCCAGCTCAGGCTCCACTCCCACCCTTGACAGAATCTGAAGTGGCAGAGCCACCTGTGCCTCCTGTTGCTAAAATAGCCCCAGCTTCCAGCCCGAATGCCGGAACCAAAGGACTTCCATCAGGAAATGCACAGCCTAAGGTCACTGTCTGCTTCTTCTTGTCCACTCTGGCTCTGTTTACAGCTTCTCTTCTTCTGCTTTGA 2271 0.4174 MWNPRALSAPLALLLLLHSLFALVSAQRSAWNTLNGGPPLVVARGGFSGILPDSSDAAYRLAVITSEPDVHVWCDVQLTKDGVGICQPSIDLANSTYITEAYPNKTTSYLVNGVPTSGYFSLDYTLKDLSNVLLTQGIYSRSIRFDGLNSLILAVDDLVSLDPKPKGIWLNIQHDAFYAQHNLSMRNTVLSASRRIVFSYISSPEVGFLRSIAARFNPKTTKLVFRFMGQSDVDPSTNQTYGSLLKNLTFIKTFSSGILVPKGYIWPVDASLYLQPHTSLVSDAHKAGLEVFASDFVNDVPFSFNYSYDPLSEYLQFVDNGDFSVDGLLTDFPVTSFEAIGCFAHLGTNATKQDKTLVISKYGASGDYPPCTDLAYQNAVSDGVDVLDCPVQMSKDGTPFCLNSIDLIESTTVAQSIFSKFAMIIPEIKSSSGIFAFNLTWNDIKSLTPSILNPFAKYRLFRNPKNKNAGTLLTLSDFLSLTKNQTSLSGVAIIVENAAYLADKQGLSVIDAVIGALSKAGYDKPGHQKVFIQSTNSSVLLKFKEKTSYELVYKIDETVGDAANAAVEDIKRFASAVVVSKDSVFPSNDKFLTGSTKTVPKLLAANLSVFVETFSNEFVSQAWDFYSDATVEINSYVQGAEINGIITDFPKTADRYRRSKCLSLGVKKPVYMDPVQPGALFGLITQDFLPPAQAPLPPLTESEVAEPPVPPVAKIAPASSPNAGTKGLPSGNAQPKVTVCFFLSTLALFTASLLLL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2557 756 Gene3D Phosphatidylinositol (PI) phosphodiesterase 38 340 IPR017946 GO:0006629|GO:0008081
Aed3g2557 756 Gene3D Phosphatidylinositol (PI) phosphodiesterase 355 656 IPR017946 GO:0006629|GO:0008081
Aed3g2557 756 SUPERFAMILY PLC-like phosphodiesterases 355 657 IPR017946 GO:0006629|GO:0008081
Aed3g2557 756 CDD GDPD_SHV3_repeat_2 357 656 - -
Aed3g2557 756 SUPERFAMILY PLC-like phosphodiesterases 38 338 IPR017946 GO:0006629|GO:0008081
Aed3g2557 756 Pfam Glycerophosphoryl diester phosphodiesterase family 363 652 IPR030395 GO:0006629|GO:0008081
Aed3g2557 756 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 14 754 - -
Aed3g2557 756 CDD GDPD_SHV3_repeat_1 39 339 - -
Aed3g2557 756 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 14 754 - -
Aed3g2557 756 ProSiteProfiles GP-PDE domain profile. 356 657 IPR030395 GO:0006629|GO:0008081
Aed3g2557 756 ProSiteProfiles GP-PDE domain profile. 39 340 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2557 Aed-Chr3 27785923 27791592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2557 5 756 Receptor kinase-like Gene Family AT4G26690 55.746 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2557 - - gmx:100811399 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2557 3 27785923 27791592 Aed3g2557 3 27785923 27791592 ECH