Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2555 ATGATTGTGTGTAGAGAAGAAGGCTTTGGGATGAAGAAGGGTAGGTTATCATCTTCAGATGATGCGGTTCAATCCCTTTCTGTGTCAAATTACCACCTTGTAGACGATGAGGGCAATCCTTTGTCTTTTACTGTGTTGCCAATTCATTGGAGTGATTCCGAGAACTCTGAAGCCAACAAAGTGAAGGTGTTCCTAGACGGCGATGCCGAGAATGTGTGGCAGAAGATTTTGTTGCAAGTCACGGCATGGAGATTTGATATTTCCAATGTGAGACCTGAGATAGCCTTGCTATCAAAGGATGGAAGGTGGATCAATCTTCAGAAGCCGAAGAAGAGCTTCCGGGATCAAATAAGGACTGTTTTGATCACCCTTCACTTCCTCCATCGTTTGAAGAAAAAACGTCATGTGTCTGCTGTATCTGTCTGGCAAGACTTGAGTAAGGATAAGGAGTTGAGCTCTTATGGGTTTAAGCCTTCACAAAAGGATTTATTGGACCATGTGCCTTTGATTGGTGAAGCTGTCAAAAGGGACGCAATCTTAGCTAAATCCAAGCTTTTGCTCATGGTTTTGGAGAAACTGAAGAGTCAAAAACTTCTTGATAAGGAAGTTAATGATTTGGCTCAACTTGGACTTACAGTTGTTGGAATTGACAGTGCTTTGATAGATGAATCTAATGAAGAGTCAGAAGAAGGGGATGATTTGGATGTTTGTGCACTTTGTGACAATGGTGGTAATATTACGTGTTGTGACGGAGTGTGCATGAGGTCGTTTCATGCTACTGTGAAGGCTGGTAGAGAAAATAGTTGTGTTTCTCTTGGTTTTACCCAGAAGGAAGTTGATGAGATCCAGAGCTTTTATTGTAAGAATTGTGAATATCATCAGCACCAATGCTTTGCATGTGGCAAGTTGGGGTCATCTGATAAAGTTAAGGGTGCCGAGGTTATTAAATGTGCTTCTGTGACCTGTGACCTGTTTTATCATCCACATTGTGTTGCAAAGTTACTTCCTCAGGTAGCTATGCATGTTGCAGAGGAACTTGAGAGAAATATTGCTGATGGGGATCTTTTTATTTGTCCCCTTCATTATTGCCATGTCTGTAAAGGATTGGAAAATAAGGTGGATCCTGAGTTGCAATTTGCTGTTTGTAGGCGTTGTCCAAAGTCATATCATCGCAAATGTTTGCCAAGAGAAATTGCTCTTGACAACAATGATAACAAAAGTAGTATACAAAGGGCTTGGGAAGGTCTTTTACCAAATAACCGCATTCTGATATATTGCTTAAATCACAAGATTGATCCTGAACTTGGGACTCCTATAAGAGATCATATAAAATTCCCCAATATGAAAGCTACTGTTCAAAAAATTAATACTACTATTGAGCGGAAGGAATCTGCAACTGAAGAGAGGGTTATACTGAAGAAGAAAAATGTTGACTTAGATAATTCATCTGGCAAAAGCATTGCTAAAGGATCTAAATTGACTGGAAAACTGTCTTCACACAAAGTTGGTAGCAAGAAGTCTAATAAGATGATTTCTGGTTCAAATATCTCAAGAAAGCCAAAATCAAAAGAAACATCAAGGTGTCTGAATGAAAATAACATGTCAATCCCAAGGAAATTTGAAATGCCTGACACTGAGCAAAACTATAACCAGCCTACAATAGGTGAGATGTTTCACAAGAAAGAGGGTTCGAAGCGAACCAAGCATGACAATCAGGTCAATAATGTGATTACAAAGCCCTTGTCTGTCATCAAGCCTATTAAATCACTGAGTGTTGAATTGCCTCCATTGGATGCTGATTCAGAGAAGAGTTTGTTGGCTTTGTATAAAGAAGCTAGATCATCAATTACATTGGAGAGTGTTTTAGAAAAGCACACGTTTGCTTCTACTCATACCCACTCGTTGAGAAATGTTGTGGAGAAGACCATTACAATGGGGAAGCTGGAAGACTCAGTTAATGCTGTTCGAACAGCTTTAAGGAAGTTAGAGAGTGGGTGCAGCATTCAGGATGCAAAAGCTGTTTGTGACCCTGGTGTTCTGAAGCAGTTATTTAAGTGGAAGGACGAGCTGAAAATATATCTTGCGCCTGTTCTATATGCTAACCGCTATACATCATATGGTTGCCATTTTACACATGTGGAAAAGCTGGAAGGGATTGTTGATAAACTTCATTGGTATGTCCAGAACAGTGATACGATTGTGGACTTCTGCTGTGGTGCTAATGATTTTAGCATCCTTATGAAGAAAAAGCTAGAGGAGAATGGGAAGAAATGCTCATACAGAAACTATGATTTACTTCCTACAAAGAATGATTTTAGTTTTGAAAGGAGGGATTGGATGACTGTCCAACCAACTGAGTTGCCAACAGGGTCACAGTTGATCATGGGGCTCAACCCGCAAGCAGCATTGGCTAACAAGTTTGTAGATAAGGCTCTTGAGTTTAAACCAAAGCTCCTAATTCTTATACTACCACCAGAGGCAGAGAGGCATGTCCCTTTTTCCATTTCATTTTATGTACCTGGATCAGTTGACAGTCAAATGGACCAAAGGAATGCAAGGGCGCCTCTACTCTCCCTTTGGAGCCGTCCTGACTGGACTAATAAACACAAGATCATAGCCCAAGGGCATGGTCATCATGTGTGCAGCCAGCATGAAGTATTATTATTAGAGACAAAAAGCTTTAATGCTGATAATCAAGAAGATCAAGCATCTACAAGTGAAGTTCAGAAAAGAAGCTTACATTTTGGTAATGTTGACAAAGAGAAACGGGAATATAGGACGGGGATGGGCAAGAGAAAACGTGTCGAGGAAAGTAATAGAACACAAGTAGGTGTGGTCTCAGCAGCCAAAAGGCCGAGTATAAATGATATGCCAGATCATAGTCAAACTAATCCAATCAATGAGAAATTTATGGAGGTTGGTGATGAACAATTAGTTTCAGTGGCTGAGTCATCTTGTAAGACGAATACAGCAGCAACTATTGGAGGTCGCACAGGTGAATCAAACCATGCCATGAGATGTTCTTTGGGTGGTTATGAACCTCGTAAGTTCAGTGGTAGTGGTGGTTTGCTTGGTTTTGCATCTGGTCCCAACTATGCATATGCAAGCCAGCATTCGTGTGGTTGGCTCGAGGAGTAA 3138 0.4066 MIVCREEGFGMKKGRLSSSDDAVQSLSVSNYHLVDDEGNPLSFTVLPIHWSDSENSEANKVKVFLDGDAENVWQKILLQVTAWRFDISNVRPEIALLSKDGRWINLQKPKKSFRDQIRTVLITLHFLHRLKKKRHVSAVSVWQDLSKDKELSSYGFKPSQKDLLDHVPLIGEAVKRDAILAKSKLLLMVLEKLKSQKLLDKEVNDLAQLGLTVVGIDSALIDESNEESEEGDDLDVCALCDNGGNITCCDGVCMRSFHATVKAGRENSCVSLGFTQKEVDEIQSFYCKNCEYHQHQCFACGKLGSSDKVKGAEVIKCASVTCDLFYHPHCVAKLLPQVAMHVAEELERNIADGDLFICPLHYCHVCKGLENKVDPELQFAVCRRCPKSYHRKCLPREIALDNNDNKSSIQRAWEGLLPNNRILIYCLNHKIDPELGTPIRDHIKFPNMKATVQKINTTIERKESATEERVILKKKNVDLDNSSGKSIAKGSKLTGKLSSHKVGSKKSNKMISGSNISRKPKSKETSRCLNENNMSIPRKFEMPDTEQNYNQPTIGEMFHKKEGSKRTKHDNQVNNVITKPLSVIKPIKSLSVELPPLDADSEKSLLALYKEARSSITLESVLEKHTFASTHTHSLRNVVEKTITMGKLEDSVNAVRTALRKLESGCSIQDAKAVCDPGVLKQLFKWKDELKIYLAPVLYANRYTSYGCHFTHVEKLEGIVDKLHWYVQNSDTIVDFCCGANDFSILMKKKLEENGKKCSYRNYDLLPTKNDFSFERRDWMTVQPTELPTGSQLIMGLNPQAALANKFVDKALEFKPKLLILILPPEAERHVPFSISFYVPGSVDSQMDQRNARAPLLSLWSRPDWTNKHKIIAQGHGHHVCSQHEVLLLETKSFNADNQEDQASTSEVQKRSLHFGNVDKEKREYRTGMGKRKRVEESNRTQVGVVSAAKRPSINDMPDHSQTNPINEKFMEVGDEQLVSVAESSCKTNTAATIGGRTGESNHAMRCSLGGYEPRKFSGSGGLLGFASGPNYAYASQHSCGWLEE 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2555 1045 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 17 957 - -
Aed3g2555 1045 MobiDBLite consensus disorder prediction 923 939 - -
Aed3g2555 1045 CDD PHD2_NSD 296 361 - -
Aed3g2555 1045 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 232 293 IPR013083 -
Aed3g2555 1045 MobiDBLite consensus disorder prediction 487 532 - -
Aed3g2555 1045 PANTHER ENHANCED DOWNY MILDEW PROTEIN 17 957 - -
Aed3g2555 1045 SMART PHD_3 363 430 IPR001965 -
Aed3g2555 1045 SMART PHD_3 296 362 IPR001965 -
Aed3g2555 1045 SMART PHD_3 236 291 IPR001965 -
Aed3g2555 1045 MobiDBLite consensus disorder prediction 487 519 - -
Aed3g2555 1045 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 294 411 IPR013083 -
Aed3g2555 1045 MobiDBLite consensus disorder prediction 923 943 - -
Aed3g2555 1045 CDD PHD3_NSD 362 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2555 Aed-Chr3 27756335 27766724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2555 - - gmx:100806429 1564.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2555 3 27756335 27766724 Aed3g2555 3 27756335 27766724 ECH
Aed4g2433 4 26545987 26556068 Aed3g2555 3 27756335 27766724 PCT