Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2552 ATGGCTATGCTTCATCTTCATCTTCATCATCATCCCCTGACAAACCCCAACGAGCTTCTCTCACTCTCATGCTCTTCTATATTCCCCCACAATGCACTCACAACCTCCGTTTCTCTCAACCCCAGAGCAACGCAAATTGCTCCTCAACGCCTAAGTCGTCGTTTCGGGTCGGTGAGATGCTCCTACGCTTATGTGGATAACGCTAAGATTAAGGTTGTCGGCATCGGTGGCGGTGGCAACAATGCCGTTAATCGTATGATCGGAAGTGGTTTGCAGGGTGTAGACTTCTATGCGATAAATACTGATGCTCAGGCACTGTTAAATTCTGCTGCTGAGAACCCTATTAAAATTGGAGAAGTTCTGACTCGTGGATTAGGTACGGGTGGGAATCCACTCTTGGGGGAACAAGCTGCAGAGGAATCGAGAGAAGCTATTGCTGATGCTCTTAAAGGATCAGATTTGGTGTTTATAACTGCTGGGATGGGTGGGGGCACCGGTTCTGGTGCTGCCCCAGTTGTAGCCCAAATATCAAAAGAGGCCGGTTACTTAACTGCCTTTGAAGCCATCGAAAGGCTGCAGAAAAACGTGGATACTCTTATAGTGATTCCAAATGATCGTCTGCTTGACATAGCTGATGAGCAGATGCCTCTACAGGATGCTTTCCGTCTTGCAGATGATGTTCTACGACAAGGAGTACAGGGAATATCAGACATTATAACAGTACCTGGACTTGTCAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCCGGGACTGCAATGCTTGGAGTAGGTGTTTCCTCTGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCAACTCTGGCTCCTTTAATTGGATCATCTATTCAGTCAGCTACTGGGGTTGTGTATAATATTACTGGCGGAAAGGACATAACCCTGCAGGAAGTGAATAGGGTGTCTCAGGTGGTGACTAGTTTGGCTGATCCTTCTGCTAATATTATATTTGGGGCTGTTGTTGATGATCGCTACACTGGGGAGATTCACGTGACTATCATTGCAACTGGCTTTTCACAGTCTTTCCAGAAGAAGTTGTTAACAGATCCAAGGGCTGCAAAGCTGCTTGACAAAGTGGCTGAAGGCCAAGAAAGCAAGGCAGTCCCTCCTCCCCTCAAGTCCTCGAACAAAGTTGAATCTAGACCATCCCCACGAAAGCTCTTTTTTTAG 1215 0.4667 MAMLHLHLHHHPLTNPNELLSLSCSSIFPHNALTTSVSLNPRATQIAPQRLSRRFGSVRCSYAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLNSAAENPIKIGEVLTRGLGTGGNPLLGEQAAEESREAIADALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTAFEAIERLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITVPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVAEGQESKAVPPPLKSSNKVESRPSPRKLFF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2552 404 SUPERFAMILY Tubulin C-terminal domain-like 245 361 IPR008280 -
Aed3g2552 404 Gene3D Tubulin/FtsZ, GTPase domain 68 184 IPR036525 -
Aed3g2552 404 Pfam Tubulin/FtsZ family, GTPase domain 69 180 IPR003008 GO:0005525
Aed3g2552 404 ProSitePatterns FtsZ protein signature 1. 100 134 IPR020805 GO:0005525
Aed3g2552 404 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 13 404 IPR045061 GO:0003924|GO:0005525
Aed3g2552 404 CDD FtsZ_type1 82 352 IPR000158 GO:0003924|GO:0005525
Aed3g2552 404 Gene3D Tubulin/FtsZ, GTPase domain 185 260 IPR036525 -
Aed3g2552 404 Hamap Cell division protein FtsZ [ftsZ]. 65 396 IPR000158 GO:0003924|GO:0005525
Aed3g2552 404 PRINTS Cell division protein FtsZ signature 250 271 IPR003008 GO:0005525
Aed3g2552 404 PRINTS Cell division protein FtsZ signature 114 134 IPR003008 GO:0005525
Aed3g2552 404 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 13 404 - -
Aed3g2552 404 SUPERFAMILY Tubulin nucleotide-binding domain-like 68 246 IPR036525 -
Aed3g2552 404 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 162 168 IPR017975 GO:0005525|GO:0005874|GO:0007017
Aed3g2552 404 Gene3D - 261 366 IPR037103 -
Aed3g2552 404 Pfam FtsZ family, C-terminal domain 260 353 IPR024757 -
Aed3g2552 404 MobiDBLite consensus disorder prediction 374 404 - -
Aed3g2552 404 ProSitePatterns FtsZ protein signature 2. 153 174 IPR020805 GO:0005525
Aed3g2552 404 SMART Tubulin_C_4 245 362 IPR018316 -
Aed3g2552 404 SMART Tubulin_4 69 243 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2552 Aed-Chr3 27748455 27752214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2552 K03531 - gmx:100808722 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2552 3 27748455 27752214 Aed3g2552 3 27748455 27752214 ECH