LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed3g2548	ATGGAGGAGGCCGTTCCCGATCCCCAACCGGAGGTGGAGCAGCCCCCGCCGCTTCAGAACGGTGACTCCGATGAGCGCTGGGCCAAGAAGCGTAAATTCGACGACGCGTCCGAATTGAAGAGAGTGGCGGAGATTGTTCTTGTTCTCTCCACCATGGCCACGGTGCGTGGGGGGAGGAAGCCCTCCGATGCAGAGGTCGAACTCATGAGGGAGGCTCGCGACAAGCTCGCCAATCTCTGCGAGGGTTTGGCTCCCAAGGACATTGTCGCCAGAGAAGCTATTGGCACCGTTATTGAGGATCTCGGATTGCACTCCAAGCTCAAGGACCAGAGATTAGGGTTTCGAACTCCCAAGATGTCTATTGCCGAGAGGTATTCTCATGCCAAGTGGAAGATGGAAGAAGCAAAGAAATTTTCTGCACCTTCTACAACGCATACGTCTCAACCCTTGCAAACAAACATTGGTGGACCAGTTGACAATCGTGTGCCATCACATGTTGTTCGGATTTTTCCTTCTGATAAATCAAGTCACCCACCAATCCCTTCTATGGGTGCCGTAGTGTCTATTCCTGCCCATGTTTCTGCAGGATCTTCTGCAGCATTGCAATATCAAGTGACCGGCAATGAAGTAAGACCACCAGTGGTTTCTGGTGTGATGCCTAGCAGTCACTTGGGGAGAAATTCATCTTCCTTAGCATTGCCAAAAGTTGAACACCCGCAGTTCAAAGTTGATGGAGGATCAAATGGGTCTTCTTACATGCTGCACGTCCAAGCAAATTCATCAGCAAACCAACCTTTGGCGAATGCTCCCACATGGTCTATACAGACTCAAGCTTCTTCATTAGCTAGAAGTGCATCAGAAAACAAGGTGCTGGTTCATAACCCCGTCAAGGTTGAAGGAACACCTGATATGTGTGAGCTCAGTGTCAATGAGGTTGATACTGTACTTCTCTGTGATGCTTGTGAAAAGGGATTTCACTTGAAGTGCCTGCAGCCATCAGTCTTGAGAGGAATTCATAATAGAGTTGATTGGCACTGTATGAGGTGCTTGAGTTTAAGTGGTGGAAAGCCTTTGCCTCCAAAATATGGTCGTGTCATGAGATCCTCAAACACACCTCCAAAATTGCCCTCTAATACAGGTGGCATTCAACCATGTTCTGAGAAGAAAGCAGAGAACATAGATCCAAAGGTCTTCCCTCAGACGTTAACAACAAATGGGAGCTCTGTTCCAACTGTTTCCGGTGGCAATCACAATGTTGAGTTGTCATCTGAATCAAAGATATTAGATACCAAAGATATGCAAGGGACTGGCATTTCATCTACCATTGAAGCTATTGATAGGAAGCCTGATCCAAACAACTCTATGAAATCTCTTAGTGCAGCTTCTAGTCCTTCCCCTTGCTTGCTAGGGGAAAATTCTGCTCAACAAATGAATTCTAAGCTTTTGACTGGTAAAGAGACTTTGGAATCTGAGTCACTCCCTAAATTATCCGAGCCAGCTAAATGTGAAAATTTGCAATCATCACAAGATTTTCAAGTTGAACAGATAATGTCACAAGACAATGCTGAAGTGTCATCAGATAAACACGTTGACAGTAATATTATGAATAATAAACAGGAGGAATCTCATGGAGGAGAAAATTTAACTTACAATATCAAGCATGATGATCAAGATGCTGCACATGCAAATTTTGTTGGAACTTCTGGAACTAATATTGATAGTAGACAGCACTCTGCATTATCTTCAGATAAGTCACATGCTGTAGAATGGATTGGTGATGTAGTGCAACTTGTAGATGAGAAAAAGTATTACCAATCTTGCTGTGTTGATGGATCTATGTGGGAAGATTGCAAAACTGGGTTAAAGTGGGTTAAGGTTTATGAATCTAATAGTGATAGAACTGAAATGGCTAGCTCTATTCGAGGCCCATGTGAAGTCCTCCCATCTGATAAATTTAAACAAGAAAATGACAGGCGATGTCAATTAGGAATTGAGGAAGGTTCTAGAGTGCAGCCCATTTTCCTTTGCAGGTGGTTTTATGATGAATTCAAAAAGTTATTTCAAGCTGTAACGAGCATTTGGTGGGGTTTCAAACAGGACATTTCTTGTATGGGTAAATTGAGCATGCATGAAGATTCATGTGAGAGTGAGACCCATTATAAGGCACATTGCAGCAGCATTGACTCCTCGTACAAGAAGGTTCCATCATTTCAGCATGAATTGCTTTTGATGTAA	2235	0.4385	MEEAVPDPQPEVEQPPPLQNGDSDERWAKKRKFDDASELKRVAEIVLVLSTMATVRGGRKPSDAEVELMREARDKLANLCEGLAPKDIVAREAIGTVIEDLGLHSKLKDQRLGFRTPKMSIAERYSHAKWKMEEAKKFSAPSTTHTSQPLQTNIGGPVDNRVPSHVVRIFPSDKSSHPPIPSMGAVVSIPAHVSAGSSAALQYQVTGNEVRPPVVSGVMPSSHLGRNSSSLALPKVEHPQFKVDGGSNGSSYMLHVQANSSANQPLANAPTWSIQTQASSLARSASENKVLVHNPVKVEGTPDMCELSVNEVDTVLLCDACEKGFHLKCLQPSVLRGIHNRVDWHCMRCLSLSGGKPLPPKYGRVMRSSNTPPKLPSNTGGIQPCSEKKAENIDPKVFPQTLTTNGSSVPTVSGGNHNVELSSESKILDTKDMQGTGISSTIEAIDRKPDPNNSMKSLSAASSPSPCLLGENSAQQMNSKLLTGKETLESESLPKLSEPAKCENLQSSQDFQVEQIMSQDNAEVSSDKHVDSNIMNNKQEESHGGENLTYNIKHDDQDAAHANFVGTSGTNIDSRQHSALSSDKSHAVEWIGDVVQLVDEKKYYQSCCVDGSMWEDCKTGLKWVKVYESNSDRTEMASSIRGPCEVLPSDKFKQENDRRCQLGIEEGSRVQPIFLCRWFYDEFKKLFQAVTSIWWGFKQDISCMGKLSMHEDSCESETHYKAHCSSIDSSYKKVPSFQHELLLM	744

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed3g2548	744	MobiDBLite	consensus disorder prediction	139	158	-	-
	Aed3g2548	744	PANTHER	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	19	304	-	-
	Aed3g2548	744	PANTHER	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	303	691	-	-
	Aed3g2548	744	MobiDBLite	consensus disorder prediction	398	441	-	-
	Aed3g2548	744	MobiDBLite	consensus disorder prediction	1	26	-	-
	Aed3g2548	744	PANTHER	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	19	304	-	-
	Aed3g2548	744	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	282	356	IPR013083	-
	Aed3g2548	744	SUPERFAMILY	FYVE/PHD zinc finger	304	357	IPR011011	-
	Aed3g2548	744	Gene3D	-	579	728	IPR043151	-
	Aed3g2548	744	MobiDBLite	consensus disorder prediction	452	471	-	-
	Aed3g2548	744	MobiDBLite	consensus disorder prediction	398	471	-	-
	Aed3g2548	744	PANTHER	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	303	691	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed3g2548	-		-	gmx:100807139	985.326

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed3g2548	3	27725944	27734275	Aed3g2548	3	27725944	27734275	ECH