Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2545 ATGGCGAACGAGAACGAACCTGCGAAGCTGCTGTTACCATACCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCGCTCGTCGCTTATTACTGTCGATTATATGCGATGGAACGGGGGTTGAAGATTCCGCAAACTGAGCGCACGAAGACCACTAATGCTCTTCTCGTTTCGCTCATGAAGCAGCTTGAAAAGGATAAAAAGTCAATCCAGTTGGGGCCTGAAGACAATTTATATCTCGAGGGATTTGCGTTGAATGTGTTTGGAAAAGCGGACAAGCAAGATCGTGCTGGAAGAGCAGATTTGAATACAGCAAAAACATTTTATGCTGCCAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGCAGTTCAGCCTGATCTGGAGCAGAAACAGAAATATGCAGTGTGGAAAGCAGCTGATATAAGAAAAGCTTTGAAAGAAGGAAGGAAGCCCACAGCTGGCCCCCCTGCCGGTGATGAGGACCTCTCTGTTCCATTTAGTTCTTCAAGTGATAGATATGACCTTGGGACTACTGAAAATACTGTTTCTAGTCCTGGACCAGAATCTGATTCATCACGTAGTTATTATAACCCTGACAACTACCAGAATCTGCCCAGCATTCATCCTGCTCCTAAATTTCATGATACTGTTAACGACCAACATTCTCCAAATATTCCGCCATCTATGCCGTTTCACGATAGAGTAGATAATAACCAACATTCTTCCATTGTTTCTCCATCATCTCACTCTTACACACCTGGAGTTTATCCTTCCCAAGACTACCAACCTCCTCCACCTTCCCAAGACTATCATTCTCTTCCACCTTCCCAAGACTATCATCCTCCTCCACCGTCCCAAGATTACCATCCTCCACCTGCCAGATCAGAGAGTTCTTATCCTGAGCATTACAACCATCAGCAATACTCTCCAGAGAATTCACAGCACTTAGGTCCTAAGTACCCTTCTCATGAAACTTCCTCTTTTTCTTATCCCAATTTTCAGTCTTATCCAAGTTTTACAGAAAGCAGCCTTCCATCAGTCCCATCAAACTATACTTATTATCAAGGGTCAGATGCTTCATATTCTTCCCAGTCGGCTCCGCTAACTACAAACCATTTATCAAGTGCTCAACACAGTTCCAGCAGCAGAAATGGAACTGTGGTGGAACCTAAGCCAACTACTCAGACATACCAGTACGACAGTAACTACCAGCCAGCACCTGAAAAAATAGCAGAGGCACACAAGGCTGCAAGATTTGCTGTTGGGGCACTGGCATTTGATGATGTTTCAATTGCAGTAGACTACTTAAAGAAATCACTTGAGTTGCTGACAAATCCATCAGCTGGCCAGTAA 1356 0.4403 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQTERTKTTNALLVSLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAADIRKALKEGRKPTAGPPAGDEDLSVPFSSSSDRYDLGTTENTVSSPGPESDSSRSYYNPDNYQNLPSIHPAPKFHDTVNDQHSPNIPPSMPFHDRVDNNQHSSIVSPSSHSYTPGVYPSQDYQPPPPSQDYHSLPPSQDYHPPPPSQDYHPPPARSESSYPEHYNHQQYSPENSQHLGPKYPSHETSSFSYPNFQSYPSFTESSLPSVPSNYTYYQGSDASYSSQSAPLTTNHLSSAQHSSSSRNGTVVEPKPTTQTYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSAGQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2545 451 MobiDBLite consensus disorder prediction 259 291 - -
Aed3g2545 451 MobiDBLite consensus disorder prediction 357 401 - -
Aed3g2545 451 Gene3D Immunoglobulin FC, subunit C 407 446 - -
Aed3g2545 451 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 277 449 IPR044538 GO:0032511
Aed3g2545 451 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 314 IPR044538 GO:0032511
Aed3g2545 451 Pfam Vta1 like 13 148 IPR039431 -
Aed3g2545 451 Pfam Vta1 C-terminal domain 408 445 IPR041212 -
Aed3g2545 451 MobiDBLite consensus disorder prediction 300 327 - -
Aed3g2545 451 MobiDBLite consensus disorder prediction 164 205 - -
Aed3g2545 451 Gene3D - 4 152 IPR023175 -
Aed3g2545 451 MobiDBLite consensus disorder prediction 148 327 - -
Aed3g2545 451 MobiDBLite consensus disorder prediction 235 258 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2545 1 118 Glycosyltransferase AT2G31960 26.772 5.08e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2545 K12199 - gmx:100783739 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2545 3 27698161 27701108 Aed3g2545 3 27698161 27701108 ECH