Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2543 ATGAGAGATATACATACGGATAATAATACTAAATGTAGTTCACCAAGAATGCCAAACGTTCGGATAAGAAGACGATCAAATGAGGTTGGTTTATTGTGTCAGATTCCTGCAGAGATAAGCAAATCAAATGGAAACAATTTACTTGTGAATGATAAATACAAATATAGATCAATGTGGATCCGTGCATACTCATCACTGTGGATGCTGGCGAGTGTGTCACTAATAATATACATGGGTCATCTTTACATCTGGGCCATGGTTGTGGTTGTCCAAATATTTATGGCCAGTGAGCTCTTCAATCTACTTAGAAGAGCAACTCAAGATAAACATCTCCCTAAGTTTAAGCTCTTGAATTGGCATTATTTCTTCACAGCAATGCTATTCGTATATGGCCGTATTCTCAGTCAACAACTTGTGAATACAGTGACCTCAGAAAAATTCTTGTATAGATTTGTGAGCAACCTGATCAAGTATCAGATGGTTATATGTTACTTCTTATATATTGCAGGTTTTGTATGGTTTATTCTTTCATTGAAGAAGAGATATTACAAGTATCAGTTTGGGCAGTATGCATGGACACATATGATACTTATTGTTGTGTTTACACAGTCTGCGTTCACTGTAGCCAACATATTTGCAGGAATATTCTGGTTTATTTTCCCTGCATCCCTTATTGCTATGAATGATGTTGGTGCATACTTCTTCGGTTTCTATTTTGGGAAAACACCTCTGATCAAGCTTTCTCCAAAGAAAACATGGGAAGGTTTCATTGGAGCCTCTTTTGCCACTATGATTGCTGCATTTACGTTTGCAAACTTCTTGGGTCGGTTCCAGTGGCTAACATGTCCAAGGAAGGATTTATCAACTGCTTGGCTTCACTGTGACCCTGACCCAATTTTTAAGCCAGACTACATTCCATTGCCAGGATTCATTCCTCATTGGCTTCCTTGGAAAGAGATAGCAGTTTTGCCAGTACAGTGGCATGCCTTGTGGATGGGACTATTTGCGTCAATCATAGCACCATTTGGAGGTTTTTTTGCTAGTGGTTTCAAAAGGGCTTTCAAAATCAAAGACTTTGGTGACAGTATACCTGGACATGGTGGATTTACAGACAGAATGGACTGCCAGATGGTAATGGCTGTTTTTGTCTACATTTACCATCAATCATTTGTTGTCGCCGAAGACTACTCAGTTGATATGTTATTAGACCAGATAATGGGGAACCTTGATTCACGGGAGCAGCTAGCTCTCTACACAAAACTCGGGCTGATATTGCAAGCAAGGCGTTTATGA 1293 0.3937 MRDIHTDNNTKCSSPRMPNVRIRRRSNEVGLLCQIPAEISKSNGNNLLVNDKYKYRSMWIRAYSSLWMLASVSLIIYMGHLYIWAMVVVVQIFMASELFNLLRRATQDKHLPKFKLLNWHYFFTAMLFVYGRILSQQLVNTVTSEKFLYRFVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFAGIFWFIFPASLIAMNDVGAYFFGFYFGKTPLIKLSPKKTWEGFIGASFATMIAAFTFANFLGRFQWLTCPRKDLSTAWLHCDPDPIFKPDYIPLPGFIPHWLPWKEIAVLPVQWHALWMGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVAEDYSVDMLLDQIMGNLDSREQLALYTKLGLILQARRL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2543 430 Pfam Cytidylyltransferase family 60 390 - -
Aed3g2543 430 ProSitePatterns Phosphatidate cytidylyltransferase signature. 348 374 IPR000374 GO:0016020|GO:0016772
Aed3g2543 430 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 9 428 - -
Aed3g2543 430 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 9 428 IPR016720 GO:0004605
Aed3g2543 430 PIRSF CDP-DAG_synth_e 2 430 IPR016720 GO:0004605
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2543 Aed-Chr3 27685093 27688111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2543 2 428 Lipid Metabolism Gene Families AT4G26770 71.494 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2543 K00981 - gmx:100805363 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2543 3 27685093 27688111 Aed3g2543 3 27685093 27688111 ECH