Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2533 ATGCTCTGCTTCTCTCAGAAACAGAAACAGAGCATGGCTCCTCTCACATTCACATTCTCCTTCTTTATCCTTATCTCATTCTTTTCTTCATCATCAGAAGCGGGGTCCATTGGAATAAACTATGGAAGGATTGCGAATGACCTACCTACACCAGCGAAAGTGGTGGAGCTTCTGAAGACACAGGGGCTGAACCGTGTGAAGCTCTACGACACCGATTCCACCGTCCTAACCGCGTTTGCCAACTCAGGAATCAAGGTGGTGGTTGCCATGCCAAACGAGCTTCTCGCCAACGCTGCCGCGGACCAGTCCTTCACCGACTCGTGGGTCCAAGCCAACCTTATCAGCTACTACCCCGCCACGCAAATCGAAGCCGTAGCTGTTGGAAACGAAGTATTCGTGGACCCAAACAACACCACCAAGTTCCTCGTACCCGCCATGAAAAATGTTCAAGCTTCTCTGCTCAAGTACAACCTCGACAAAAACATTAAAATCTCCTCTCCGATCGCACTCTCCGCGCTACAAACCTCCTTCCCCGCCTCGTCCGGTTCCTTCAAAACCGAACTCGTCGAACCGGTTATTAAACCCATGCTGGACTTGCTCCGGCAAACCGGTTCCCGCCTTATGGTAAACGCGTACCCATTCTTTGCTTACGCTGCAAACTCTGATAAAATCTCTATAGACTACGCGCTCTTCAAGGAAAACCCCGGCGTTGTCGATTCCGGTAATGGTTTGAAATACACGAACCTATTCGACGCTCAAATCGACGCCGTTTTTTCTGCCATGTCAGCACTCAAATACGACGATGTCAAGATCACAGTCTCCGAAACGGGGTGGCCTTCCGCAGGGGACTCTAACGAGATCGGAGCAGGCCCCGAGAATGCGGCGTCGTATAACGGAAACTTGGTAAGGCGCGTTTTAAGTGGTAGTGGGACCCCCTTGAAGACCAATGAGTCACTCGACGTTTTTCTCTTCGCGCTATTCAATGAAAACCAGAAAACAGGTCCCACATCGGAGAAGAACTACGGGCTGTTCTATCCCAGCGAGAAGAAGGTCTATGATATTCCGCTTACAGCGGATGAGATCAAGGAGTCGTCGCCTTCCGGCGTCGGGAAGAGCCAGGTTCCGGTGAGCGGAGACGTGTCGACGACGTCGTCTAAGGGTCAGACGTGGTGCGTGGCCAGTGGCGGTTTATCGGAGAAGAAGTTGCAGAACGCTCTTAATTACGCCTGCGGAGAGGGTGGGGCTGATTGCACTCCCATTCAACCAGGTGCCACGTGTTACAATCCTAACACTTTAGAGGCCCATGCTTCCTACGCCTTCAACAGTTACTATCAGAAGAAGGCACGTGCGGCTGGCACATGCGATTTTGGCGGTACTGCTTATGTCGTCACTCAGCCTCCAAAGTATGGTAACTGCGAATTCCCTACAGGATACTGA 1437 0.5157 MLCFSQKQKQSMAPLTFTFSFFILISFFSSSSEAGSIGINYGRIANDLPTPAKVVELLKTQGLNRVKLYDTDSTVLTAFANSGIKVVVAMPNELLANAAADQSFTDSWVQANLISYYPATQIEAVAVGNEVFVDPNNTTKFLVPAMKNVQASLLKYNLDKNIKISSPIALSALQTSFPASSGSFKTELVEPVIKPMLDLLRQTGSRLMVNAYPFFAYAANSDKISIDYALFKENPGVVDSGNGLKYTNLFDAQIDAVFSAMSALKYDDVKITVSETGWPSAGDSNEIGAGPENAASYNGNLVRRVLSGSGTPLKTNESLDVFLFALFNENQKTGPTSEKNYGLFYPSEKKVYDIPLTADEIKESSPSGVGKSQVPVSGDVSTTSSKGQTWCVASGGLSEKKLQNALNYACGEGGADCTPIQPGATCYNPNTLEAHASYAFNSYYQKKARAAGTCDFGGTAYVVTQPPKYGNCEFPTGY 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2533 478 MobiDBLite consensus disorder prediction 366 381 - -
Aed3g2533 478 Pfam X8 domain 389 460 IPR012946 -
Aed3g2533 478 Gene3D - 383 474 - -
Aed3g2533 478 Gene3D Glycosidases 35 363 - -
Aed3g2533 478 MobiDBLite consensus disorder prediction 362 381 - -
Aed3g2533 478 SUPERFAMILY (Trans)glycosidases 37 354 IPR017853 -
Aed3g2533 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 471 IPR044965 GO:0004553|GO:0005975
Aed3g2533 478 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 17 471 - -
Aed3g2533 478 Pfam Glycosyl hydrolases family 17 37 354 IPR000490 GO:0004553|GO:0005975
Aed3g2533 478 SMART X8_cls 389 474 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2533 Aed-Chr3 27642702 27644934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2533 32 467 Glycoside Hydrolase AT5G55180 72.769 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2533 - - gmx:100803406 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2533 3 27642702 27644934 Aed3g2533 3 27642702 27644934 ECH