Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2532 ATGGAGAAAGGCAACGTTCAAAAGAACATACGGTGTTTGACACTATGCATTGCTGCTTTAGTCTCTCTCATTCTTCCCTACTGTGAGTCCTTCAACTATGGGCAAGCCCTGTCTCAGAGCCTTCTCTATTTTGAGTCACAACGTTCAGGTCGCTTACCTTACAATCAAAGGGTCACTTGGCGTCACCATTCTGCCCTCACTGATGGCCTAGAACAAGGGGTGGACTTGGTGGGAGGGTATTACGATGCAGGGGACAATGTCAAATTTGGGCTACCAATGGCATTCACCATAACGCTCCTCTCATGGGCTGCCATAGAATACGGCGAGCAAATCGCCGCTGCCGGCGAGTATACTCACGCTCTCGAGGCCATCAAGTGGGGGACTGATTATTTCATCAAGGCCCATACACAACCAAATGTTCTTTGGGTTCAGGTGGGTGACGGGGACACTGATCACTACTGTTGGCAGCGGGCGGAGGACATGACAACGTCACGGCGAGCTTATAAGGTTGATGCGAACAACCCCGGCTCAGATGTTGCCGGCGAGACGGCGGCAGCATTGGCAGCGGCGTCCATTTTGTTTAGGACAACTAACCCACATTACTCCAAACTACTTTTGCATCATGCACAACAGTTGTTTGAGTTTGGTGACAAGTACAAGGGCAAGTATGATGAGAGTGTTGGAGTGGCTAAAGGGTATTATGCTTCGGTTAGTGGGTACATGGATGAGTTACTGTGGGCAGCAGTTTGGTTATACAGGGCCACCCAAAAGGAGGACTATTTAACCTATTTTTTGGACAAGGCTTATGACTTTGGTGGGACCACTTGGGCCATCACTGAATTCAGCTGGGACGTTAAATACGCTGCTGTTCAAGCCATTGCTTCCATGTTTCTTATGGAGGAAAAGACGCACGATAAGAAACACCAAGTCATACTGAAGCAGTATCGTTCAAAAGCCGAGCACTACCTCTGCGCGTGTCTCAACCTCAACAACAACAACGCGAGCAACGTGGAGCGCACCCCAGGAGGGTTATTATACATCCGCCAATGGAATAACATGCAATACGTAGCAACGGCGTCGTTTCTTCTCACTCTCTATTCTGATCATCTCCTAGCCGCAGATCAGAAGCTTCATTGTCAAAAAGGGGAAGTAGGTCCCCATGAGATGCTGGCATTTGCTAAATCGCAAGTTGATTACATTTTAGGTTCTAATCCAATGGGTATGAGCTACTTGGTAGGCTACGGTCCCAAATTTCCCCAGAGGGTGCACCATAGGGGTGCATCCATTGAATCATATGGAGAGAACAAGGGTTTTATTGGGTGCACTCAGGGTTATGATAACTGGTATGGACGCGTTGAACCCAATCCAAATCTACTCATTGGGGCTCTCGTTGGTGGGCCTGATATCAATGACCAATTTAAAGATGAAAGGCGAAATTACATTCAAACAGAGGCTTGCACCTACAATACGGCAGCACTGGTTGGGGTTTTTGCTAGATTGCATCATCATCATCCCAATGAAACCCCTTTGGTAGCTTCTGGCTAA 1545 0.4796 MEKGNVQKNIRCLTLCIAALVSLILPYCESFNYGQALSQSLLYFESQRSGRLPYNQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITLLSWAAIEYGEQIAAAGEYTHALEAIKWGTDYFIKAHTQPNVLWVQVGDGDTDHYCWQRAEDMTTSRRAYKVDANNPGSDVAGETAAALAAASILFRTTNPHYSKLLLHHAQQLFEFGDKYKGKYDESVGVAKGYYASVSGYMDELLWAAVWLYRATQKEDYLTYFLDKAYDFGGTTWAITEFSWDVKYAAVQAIASMFLMEEKTHDKKHQVILKQYRSKAEHYLCACLNLNNNNASNVERTPGGLLYIRQWNNMQYVATASFLLTLYSDHLLAADQKLHCQKGEVGPHEMLAFAKSQVDYILGSNPMGMSYLVGYGPKFPQRVHHRGASIESYGENKGFIGCTQGYDNWYGRVEPNPNLLIGALVGGPDINDQFKDERRNYIQTEACTYNTAALVGVFARLHHHHPNETPLVASG 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2532 514 SUPERFAMILY Six-hairpin glycosidases 30 507 IPR008928 GO:0005975
Aed3g2532 514 PANTHER ENDO-1,4-BETA-GLUCANASE 8 505 - -
Aed3g2532 514 Gene3D - 28 511 IPR012341 GO:0005975
Aed3g2532 514 Pfam Glycosyl hydrolase family 9 33 496 IPR001701 GO:0004553|GO:0005975
Aed3g2532 514 PANTHER ENDOGLUCANASE 8 505 - -
Aed3g2532 514 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 399 425 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2532 Aed-Chr3 27633898 27635881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2532 31 499 Glycoside Hydrolase AT2G32990 75.480 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2532 - - gmx:100786912 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2532 3 27633898 27635881 Aed3g2532 3 27633898 27635881 ECH