Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2524 ATGGCATCTTCTTCATCACTAACCATTTGGACAGTACTACTAATGTCCTTTCTCTCCTTGGCCCTGAGTGAGAATGCTAAACCATGCAGTGAAGAATTCCTGAAACTAGCCGAACAGAAAAACATCACAGAGTGCAAGACACTGCGCACTCTGGGGGCAGAGTTTGCATGGTCCCACCACAGCGTCACCAATGAATCAACCGTAGTTGAAATCCTATTCGGTGTGAGACTCTCCACACCAAATGGGTGGATAGCGTGGGGTGTGAACCCAGGAAAAAGGGCTGAGATGATTGGAACCAAAGCCATCATAGCCATTAAAAAGGCTGATGGCAAGTGGGGAGTGGAGACATACAACGTGACGAAGGAGACCAGAAACGGGTGCAGCCTTCTGCCGTCAAAAATAGCGTTTGTGACGAATAAGTCAATTGAGGGAAAGGTGGGTGATTTGAACAGCATGTATGCGAGATTGGTGCTTCCTTCAGATGTGTATAACATTACGAAGCTGAACCATGTGTGGCAAGTTGGGTATGCGATTGCGAATGAAGATGGGCATCCCCTGGCACATCCCACAACTCTTCGGAACGTCGACAGCACAGAGGTTATTGATTTGACTGATAAAAACGGCCGCGGCACTGGACAGTACCGGAGTTATCTTAGATCGGTGCATGGAGTCCTGAACATTATCGGATGGGGAACACTGTTGCCGATTGGAATAATAATAGCAAGGTACTTTCGGGTGTTTCCATTTAAATGCGAGCCAATGTGGTTTAACCTGCACGTTGGTTTCCAATTAACCGGTTTTCTTGTTGGAACCACTGGATGGGCTATTGGACTAAGTCTGGGACATTCTTCAAGATACTACACCCTCCACACTCATCGAACCTATGGCATTCTCATTTTCACCTTTAGCACAATCCAGATGTTGGCTTTTCGGTTGAAGCCGAAGGTGACGGATGATTACCGGAAATATTGGAATATGTATCATCATTTTCTTGGTTATGGACTGCTGGTTATCATATTCCTAAACATATTCAAAGGAATAAACATTTTGGAAGGGGGAGTTGCATGGAAGTGGGGATACATTGGAAATCTTGCTTTATTGGGTACCATCGCATTTGGTTTGGAAGTATTCACGTGGATACGCTTCTTCATCTTAAAGCACAGGCAGGGAATCAAGTCAGCTGAAACAGGACCAAAACAGAAGACGCCTTTTGCCTAA 1218 0.4548 MASSSSLTIWTVLLMSFLSLALSENAKPCSEEFLKLAEQKNITECKTLRTLGAEFAWSHHSVTNESTVVEILFGVRLSTPNGWIAWGVNPGKRAEMIGTKAIIAIKKADGKWGVETYNVTKETRNGCSLLPSKIAFVTNKSIEGKVGDLNSMYARLVLPSDVYNITKLNHVWQVGYAIANEDGHPLAHPTTLRNVDSTEVIDLTDKNGRGTGQYRSYLRSVHGVLNIIGWGTLLPIGIIIARYFRVFPFKCEPMWFNLHVGFQLTGFLVGTTGWAIGLSLGHSSRYYTLHTHRTYGILIFTFSTIQMLAFRLKPKVTDDYRKYWNMYHHFLGYGLLVIIFLNIFKGINILEGGVAWKWGYIGNLALLGTIAFGLEVFTWIRFFILKHRQGIKSAETGPKQKTPFA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2524 405 PIRSF UCP037471 1 403 IPR017214 -
Aed3g2524 405 Gene3D - 204 382 - -
Aed3g2524 405 SMART 561_7 221 347 IPR006593 -
Aed3g2524 405 ProSiteProfiles Cytochrome b561 domain profile. 186 383 IPR006593 -
Aed3g2524 405 Pfam Protein of unknown function (DUF568) 96 203 IPR045265 -
Aed3g2524 405 ProSiteProfiles DOMON domain profile. 51 175 IPR005018 -
Aed3g2524 405 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 1 390 - -
Aed3g2524 405 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 1 390 - -
Aed3g2524 405 CDD Cyt_b561_FRRS1_like 215 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2524 Aed-Chr3 27582448 27583805 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2524 - - gmx:100791697 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2524 3 27582448 27583805 Aed3g2524 3 27582448 27583805 ECH