Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2484 ATGTCGAAGATGAAGACAGCGTCCTGGCTGCTTCTGCTCCTAGTGTCAGTGTCCGTATCGGGGCTTCAAGTTTGGGCCCTGAAATCACCGTTTCAGCCACGCGACGTGCTTCCTCTGCTTCCGAGACAGGTGTCGTGGCCCATCCTGAACCGTCTCCACAGCGCCGTGGATCTCCTACCCGTCTTCGTCGGCGCCGCCTCTTCGCCGGACGACAATCTCCAGTGGAAAGGCGCCTGCTTCTACCAGAACAAGGCCTGGATGGTCTTTCACAACAACAGCGGCACTCAATATGGCGGCGGAACCCTTCACTTAAAGATTAGCAATGCTCACAGTTGGACATGCATGGATCTTTATATTTTTGCCACGCCATATCGTGTAACATGGGATTATTATTTCCTGGCCCGGGAGCATACACTTGAGTTCAATGAGTGGGAAGGGAAAGCTGAGTACGAGTATGTAAAAAACCATGGGTTATCAATTTTCCTCTTACAAGCTGGGATGTTGGGGACCCTTCAAGCACTTTGGGAGGTCTTCCCACTATTTACAAACACTGGGTGGGGGGAGAACTCCAATATTAAATTTTTGGAGAAACATATGGGAGCTTCTTTTAAAGTGCGCCCTCAGCCTTGGGTTACAAATGTCAGTGCTGATGACATTCATTCTGGAGATTTCCTTGCCGTTTCGAAAATTCGAGGTCGCTGGGGTGCTTTTGAGAGCCTAGAGAAGTGGGTTAGTGGAGCTTATGCTGGCCACTCTGCTGTTTGCCTAAGGGACTCCGATGGGAAGCTTTGGGTTGGAGAGTCAGGACATGAAAATGAAAAGGGAGAAGATATAATAGCTATAATACCATGGGAAGAGTGGTGGGACTTTGAACTGAATAAAGATGATTCCAATCCACATATTGCTCTGCTTCCATTGCACCCTGACTTGCGTGCCAAGTTTAATGAGACTGCTGCATGGGAGTATGCATTGAGCATGACAGGAAAACCATATGGTTACCATAACATGATCTTCAGTTGGATAGACACTTTAACTGGAAACTATCCACCCCCCTTGGATGCTAATGTGGTTGCTTGCGTTATGACAATTTGGAGTCAACTTCAACCTGAATATGCAGCAAATATGTGGAATGAAGCCCTGAACAAACGACTTGGAACTAAAGGACTTGACCTTCCAGAAGTTTTAGTAGAAGTTGAAAAGCGTGGATCATCTTTTGATGAACTGCTGACAATTCCTGAACAGGATGATTGGATCTACAGTGATGGGAAGTCGACTTCTTGCATTGCTTTTATACTTGAGATGTACAAGGAGGCAGGGCTGTTTGATCCAATTGCTAGTTCTGTTCAAGTGACAGAGTTTACGATAAAAGATGCTTACATTCTCAATTTTTATGAGAGCAATTCTAGTCGCTTGCCAAAATGGTGCAATGATGGAGACACGGTGAAGCTTCCTTATTGTCAAATTAAAGGCAAGTATCGAATGGAACTACCTGGATACAACACCATGCAACCATATTCTCATATGAATGAAAGGTGTCCATCTCTTCCTCCAAAGTACTTCAGATCCCAGAAATGCTAG 1578 0.4569 MSKMKTASWLLLLLVSVSVSGLQVWALKSPFQPRDVLPLLPRQVSWPILNRLHSAVDLLPVFVGAASSPDDNLQWKGACFYQNKAWMVFHNNSGTQYGGGTLHLKISNAHSWTCMDLYIFATPYRVTWDYYFLAREHTLEFNEWEGKAEYEYVKNHGLSIFLLQAGMLGTLQALWEVFPLFTNTGWGENSNIKFLEKHMGASFKVRPQPWVTNVSADDIHSGDFLAVSKIRGRWGAFESLEKWVSGAYAGHSAVCLRDSDGKLWVGESGHENEKGEDIIAIIPWEEWWDFELNKDDSNPHIALLPLHPDLRAKFNETAAWEYALSMTGKPYGYHNMIFSWIDTLTGNYPPPLDANVVACVMTIWSQLQPEYAANMWNEALNKRLGTKGLDLPEVLVEVEKRGSSFDELLTIPEQDDWIYSDGKSTSCIAFILEMYKEAGLFDPIASSVQVTEFTIKDAYILNFYESNSSRLPKWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPYSHMNERCPSLPPKYFRSQKC 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2484 525 PANTHER OS01G0793500 PROTEIN 19 525 - -
Aed3g2484 525 Gene3D endopeptidase domain like (from Nostoc punctiforme) 213 456 - -
Aed3g2484 525 PANTHER PLANT/F10M23-360 PROTEIN 19 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2484 Aed-Chr3 27366185 27371359 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2484 - - gmx:100796964 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2484 3 27366185 27371359 Aed3g2484 3 27366185 27371359 ECH